| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3831 |
|---|
| Symbol | |
|---|
| ID | 8227425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 4669429 |
|---|
| End bp | 4670271 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644931671 |
|---|
| Product | rod shape-determining protein MreC |
|---|
| Protein accession | YP_003088200 |
|---|
| Protein GI | 255037579 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1792] Cell shape-determining protein |
|---|
| TIGRFAM ID | [TIGR00219] rod shape-determining protein MreC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.277446 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.172349 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCAAC TCGTTGATTT CGTTGTCCGG AATCGTTTCT TTTTGGTTTT TGTGTTGCTG
GAAGTGCTCA GCGTTTGGCT GATCGTGCGC AACAACACCT ACTGGGGAGC TACCTATTTC
AATACTTCGA ACTACTACGT GGCCAAAACG CTCGCGTTTT CGAACTCGGT GCGGGATTAC
ACGAAGCTGA ACGAGATCAA CGCCGACCTT GCGAACGAAA ACGCGCATTT ACACGCGCAG
GTAGCCCGGC TGAGCCAGAC GAACGCAGCC CAGTCGCCGG CCGGCTATGT GCCGGATTCG
GCCTTTGCGG CGCGTTTTAC GTACACGGTG GCGAAGGTGG TGGACAACGA AACCAACAAG
GCCAACAACG TCATCACGAT CGATAAGGGC ACGGCGCACG GCATTAAGGC TGGGATGGGC
GTCATTTCGG CCACGGGTGT GGTAGGGAAA GTGCGGTTCT GCTCGGAGCA TTATTCGGTG
ATCACGTCCA TCCTGCATTC GAACTTCATG GTTTCGTCCA AGCTCGTGCG GAGCAAGGAG
ATCGGTTATG CCAAATGGGA TGGAAAAGAT CCAAACCTGA TCGACATGAT CGACGTTTCG
AAGTATACCA AAGTTTACAA GGGCGATTCG GCGGTGACGT CGGACCAGAA CTCGGTATTC
CCGCCGAACA TCATGGTAGG CAGGGTTGAA ACCGTGGCCG TAAACCCGAA CCAGACGTTC
TATAACATTA CCCTGCGCCT CGCAACCGAC TTTCGGAACC TGTCTTACGT GTATGTGGTA
CAAAATCACC AACTTGTAGA ACAGGAAAAC CTTAAACTAA GAACCATAGA ACCCAAGAAA
TGA
|
|---|
| Protein sequence | MLQLVDFVVR NRFFLVFVLL EVLSVWLIVR NNTYWGATYF NTSNYYVAKT LAFSNSVRDY
TKLNEINADL ANENAHLHAQ VARLSQTNAA QSPAGYVPDS AFAARFTYTV AKVVDNETNK
ANNVITIDKG TAHGIKAGMG VISATGVVGK VRFCSEHYSV ITSILHSNFM VSSKLVRSKE
IGYAKWDGKD PNLIDMIDVS KYTKVYKGDS AVTSDQNSVF PPNIMVGRVE TVAVNPNQTF
YNITLRLATD FRNLSYVYVV QNHQLVEQEN LKLRTIEPKK
|
|---|
| |