| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3807 |
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| Symbol | |
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| ID | 8227396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4637388 |
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| End bp | 4639019 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644931642 |
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| Product | delta-1-pyrroline-5-carboxylate dehydrogenase |
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| Protein accession | YP_003088176 |
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| Protein GI | 255037555 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01236] delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.348767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.341388 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGATAG GAATTTTCAA TGTGCCGGCG CTCAAAAACG AGCCGGTTAA AAGTTACGCG
CCGGGTACGC CGGAGCGCGC AGAACTCAAA AAAGCGCTGG CCGATGCCCG TGCGAAGACC
ATTGAGATAC CACAATATAT AGGTAGCGAA GAAATCTACT CCGGGAACAA GCAAAAGGTG
TCGCCGCCGC ATGACCATCA GCACGTGCTG GGCTATTTTC ATGAGGGTTC GAAGGAAGAT
GTCAGCAAAG CGATAGATGC TGCATTGGAG GCAAGGAAAA GCTGGGCTAC CCTCACATGG
GAGCAGCGTG CAGCGATTTT CTTAAAAGCA GCGGAGCTCA TTGCCGGACC GTATCGCGCT
GAAATGAATG CGGCTACGAT GTTGGGGCAA TCCAAAAATG CCTATCAGGC CGAGATTGAT
TCGGCTTGTG AAATCATTGA CTTTCTGCGG CTTAATGTGA ACTTCATGCG GGATATTTAT
GAAGAGCAGC CAATCTCTTC GGAGGGTGTC TGGAACCGGA TGGAGTATCG CCCGCTGGAA
GGTTTCCTAT TTGCCATTAC GCCGTTCAAC TTTACGGCCA TTGCCGGAAA CCTGCCTGCT
GCGCCTGCGT TGATGGGCAA TGTGGTGATC TGGAAGCCGG CATTTACCCA GGTATATGCA
GCTAATGTGA TCATGAAAGT ATTCAAAGAA GCGGGGCTGC CGGATGGCGT TATTAATATG
GTTTTGGTGG ATGGCCCGGT GGCCGGTGAC GTGATTTTCA AGCATCCTGA TTTCTCGGGT
GTCCATTTTA CAGGCAGTAC CAAGGTGTTT CAAACGATCT GGAAAACGAT CGGGGAGAAT
ATAGCTACTT ATAAGACATT TCCAAGAATC GTAGGCGAGA CGGGCGGTAA GGACTTTGTG
CTGGCGCATA AGTCAGCCAA TGCAAAGGAA GTGGCTACCG GCCTGGTTCG TGGTGCATTC
GAATACCAGG GCCAGAAATG CTCGGCGGCT TCACGGGCTT ATATTCCTTC CAATTTGTGG
GAAGAGGTGA AAGGATTTAT GCTGGCTGAC CTTGCGGAGA TCAAAATGGG CGGTGTAGAG
GACTTCTCGA ATTTCGTGAA TGCGGTCATC GACGAAAAAT CGTTCGACAA GATCGCTTCT
TATATAGATG GGGCTAAGAC CAGCTCCGAC ACAGAAATCG TCGCAGGAGG CAATTTTGAC
AAGAGTAAAG GCTATTTTGT GGAGCCGACC ATCATCCAGG CCTTCAAGCC GGATTATGTG
ACGCTATGCG AGGAGATCTT CGGGCCGGTG CTTACTGTAT ATGTGTATGA TGAAAACGAG
TTCGAGCAGA TCATCCCTGT GATCGATTCG ACTTCGCCTT ATGCATTAAC CGGTGCCGTG
TTTGCGAAGG ACCGCTATGC GATTGAATAT GCGACGAGGC ATTTGGTGAA TGCAGCTGGT
AACTTCTACA TTAATGACAA GCCGACGGGT GCCGTGGTAG GCCAGCAGCC ATTCGGCGGT
GCGCGGGCAT CGGGTACAAA TGATAAGGCG GGATCGGTTT TGAACCTGCT CAGATGGGTA
TCACCGCGGG CATTGAAAGA GACGCTTGTT TCGCCGAAAG ACTATAAATA TCCCTTCCTT
TCCGGGGAAT AA
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| Protein sequence | MSIGIFNVPA LKNEPVKSYA PGTPERAELK KALADARAKT IEIPQYIGSE EIYSGNKQKV
SPPHDHQHVL GYFHEGSKED VSKAIDAALE ARKSWATLTW EQRAAIFLKA AELIAGPYRA
EMNAATMLGQ SKNAYQAEID SACEIIDFLR LNVNFMRDIY EEQPISSEGV WNRMEYRPLE
GFLFAITPFN FTAIAGNLPA APALMGNVVI WKPAFTQVYA ANVIMKVFKE AGLPDGVINM
VLVDGPVAGD VIFKHPDFSG VHFTGSTKVF QTIWKTIGEN IATYKTFPRI VGETGGKDFV
LAHKSANAKE VATGLVRGAF EYQGQKCSAA SRAYIPSNLW EEVKGFMLAD LAEIKMGGVE
DFSNFVNAVI DEKSFDKIAS YIDGAKTSSD TEIVAGGNFD KSKGYFVEPT IIQAFKPDYV
TLCEEIFGPV LTVYVYDENE FEQIIPVIDS TSPYALTGAV FAKDRYAIEY ATRHLVNAAG
NFYINDKPTG AVVGQQPFGG ARASGTNDKA GSVLNLLRWV SPRALKETLV SPKDYKYPFL
SGE
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