Gene Dfer_3804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3804 
Symbol 
ID8227393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4631885 
End bp4633501 
Gene Length1617 bp 
Protein Length538 aa 
Translation table11 
GC content48% 
IMG OID644931639 
Producthypothetical protein 
Protein accessionYP_003088173 
Protein GI255037552 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.387517 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.357577 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAGAA CGATTGTATT TGCCATCCTC GTGCTGTTTT TTTTCGAACG CTGCGCCCAG 
CAAGTCCCGC CCACAGGAGG TAAGCGCGAT TCCATTCCGC CCAACCTCGT GGAAAGTAAT
CCATTGAACA AAACCCTCAA TTTTAAAGGC AAAAAAATCG AACTGTTCTT CGACGAATAT
GTGGTCGTTG ATAATATCAA TCAAAAACTC GTGATCACGC CGGAAGCCGA CAACCCCTAT
TCCTACAAGC AAAATGGCAT GTCGGTGGCG CTTACATTCA AAAATCAGTT CAAGGACAGC
ACTACTTACA CGCTGAATTT CGGTGATGCG ATCAAGGATT TTGCAGAAAA AAATCCGGCA
AAAAACCTCA AGATCGTGTT CAGCACCGGC ACCTCGCTCG ACTCCGGGCG CGTGTACGGA
ACCCTCAAAG ACATTCGCAC AAACAAACCG ATTTTCGACG CCCTGGTAGG TCTTTATAAT
GTGAGCGACA CGCTCAATAT CGCCAAGCAG AAGCCCTACT ATTTCTCCCG CACCGACAGC
AGCGGCGTAT TTTCCATCGA GAACATCCAG ACAAGGCAAT ACAAACTGAT CGCGATCGAC
GACAAAAACC GGAATATGCT CTACAATGCA AAGGACGAAC GCATGGGATT TTTGGGAAAA
ACCATCACCG CCGGCACCGA TTCGGCGTCC TACGCGCTGA ATATGTACCT GTCGGACAAC
ACGGCCCTCA AAGTTCAAAG GACGCTGCCC AAAGTGAATA ATTACGCTGT GGTTTTCAGC
AAACCGATCG AAAACGTTGA AGTCACATTC GTGAATAAGG ATTCACTGCC CTACCTGCTC
GAGCCGGGGG GCACAAACCT CAAATTTTTC AATGTAGAGC CTCATGCAGA CACCACGCTG
GTTAAGCTTA AAACCCTCGA TTCCCTCGGG ATTACGACGG AATTCGAACA AAAAATCGCA
TTTCAGGCGC AGCGCGGCAA AACCCGCCAG CTCGATCCGC TCACACTTAC CACCATTCCG
GAAGCCAACA AGCCACTCAC AAATGAATTC ACCTACAAGC TGATCCTGAA CAAGCCCGTG
AAGACATTAG ATGATCAAAA AATCGCCATT ATCTCCGACA GCCTCACAAA TGAACCATTA
AATGCATTTA AATACACCTG GAACACCAAC CGGAATATCC TCACGATTGC CGCAAAATCC
TTTGCCAAGG ACAGCGTGAA ATTCGACATT CCGAAGGGCT CCATTATCAG TGTGGAAGGC
GATACACTGG CTAAAACGCT GCTCAAACAT CCTGTGCTAA ACGAAGAGGA TTTCGGCGTG
ATACGCGGGC GCGTAACGAA TGCTGATACG GCCGTCCACT TCATTCTTGA GCTCGTAGAT
GAGCAGTATA AGGTCGTCGA AACGGTGTAC GCATCGCCGT ATACTTTCAA GAATATCCCT
CAAGGAAAAT ACTTTTTACG CATCACGGTC GACAAAAACC GGAACAGAAG ATGGGACACT
GGCCAAATCG ACAAGGATCT ACAGCCTGAA CCGGTTTATT ACCTGCCCGA CAAGATCCTT
TTGAAGGCCA ACTTCGAGCT GAATGACATC AATATCACCA TTCCTGAAGA AAAATAA
 
Protein sequence
MLRTIVFAIL VLFFFERCAQ QVPPTGGKRD SIPPNLVESN PLNKTLNFKG KKIELFFDEY 
VVVDNINQKL VITPEADNPY SYKQNGMSVA LTFKNQFKDS TTYTLNFGDA IKDFAEKNPA
KNLKIVFSTG TSLDSGRVYG TLKDIRTNKP IFDALVGLYN VSDTLNIAKQ KPYYFSRTDS
SGVFSIENIQ TRQYKLIAID DKNRNMLYNA KDERMGFLGK TITAGTDSAS YALNMYLSDN
TALKVQRTLP KVNNYAVVFS KPIENVEVTF VNKDSLPYLL EPGGTNLKFF NVEPHADTTL
VKLKTLDSLG ITTEFEQKIA FQAQRGKTRQ LDPLTLTTIP EANKPLTNEF TYKLILNKPV
KTLDDQKIAI ISDSLTNEPL NAFKYTWNTN RNILTIAAKS FAKDSVKFDI PKGSIISVEG
DTLAKTLLKH PVLNEEDFGV IRGRVTNADT AVHFILELVD EQYKVVETVY ASPYTFKNIP
QGKYFLRITV DKNRNRRWDT GQIDKDLQPE PVYYLPDKIL LKANFELNDI NITIPEEK