Gene Dfer_3802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3802 
Symbol 
ID8227391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4629052 
End bp4630914 
Gene Length1863 bp 
Protein Length620 aa 
Translation table11 
GC content54% 
IMG OID644931637 
ProducttRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 
Protein accessionYP_003088171 
Protein GI255037550 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division 
TIGRFAM ID[TIGR00136] glucose-inhibited division protein A 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.245205 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.720677 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCAGG AATATGATGT GATCGTGGTA GGCGCAGGCC ATGCCGGATG CGAAGCCGCC 
GCTGCCGCAG CGACGATGGG CTCCTCGGTG CTGCTGATCA CAATGAATAT GCATACCATC
GCGCAGATGT CGTGCAACCC CGCAATGGGG GGCGTCGCGA AGGGACAGAT CGTTCGCGAG
ATCGACGCGC TCGGCGGACA GTCGGGGATC GTCTCCGACA AAACCATGAT CCAGTTCCGC
ATGCTGAACC TCTCCAAAGG CCCTGCCATG TGGAGCCCGC GCTGCCAAAG CGATAGAGTT
AGGTTTGCGG AGGAATGGCG CTCCATCCTT GAGAACAATC CCAATGTAGA CTTCTGGCAG
GATACGGCTA AGAACATCAT CGTCGAGGAC GGCAAAGTGT GCGGCGTGGT GACCAGCCTG
GGGATACAGA TCCGCTCAAA GGCAGTAGTG CTAACCAATG GAACCTTCCT GAATGGACTT
ATCCATATTG GCGAAAAGAA CTTCGGCGGA GGCCGCACGG GCGAGAAATC TGCCACCGGT
TTGACCGAAC AATTGGTTAC CCTCGGCTTC GAGGCAGGAC GGATGAAAAC CGGCACGCCA
CCGCGAGTGG ATGGTCGCTC GCTCGACTAT TCTAAAATGG AGGAGCAACC CGGCGACGAA
GTTCCAGCTA AGTTCTCCTA CACCGACACC AAGCCGCTCG CCAAACAACG CAGCTGTTGG
ATCACCTACA CCAACCAGGA AGTCCACGAT GTGCTGAAAA CCGGATTCGA GAAATCGCCG
ATGTTTTCGG GACGCATTAA GGGACTCGGT CCCCGCTACT GCCCGTCGGT AGAGGACAAG
ATCAATCGCT TTGCCGATAA GGACCGCCAC CAGATTTTCG TGGAGCCGGA AGGCTGGGAT
ACCGTGGAAG TGTATGTGAA TGGCTTCTCG ACCTCGCTTC CGGAAGACGT GCAATACGCC
GCGCTTCGGA AAATTCCTGG TTTTGAAAAT GCCAAAATGT TCCGCCCCGG CTACGCGATC
GAATACGATT ACTTCCCGCC GACGCAGCTG AAATCGACGC TCGAGACCCA CTTGGTGAAG
AACCTATTTT TTGCAGGGCA AATCAACGGA ACGACGGGCT ACGAGGAAGC GGCTTGCCAG
GGTCTCATGG CAGGGATTAA CGCGCACAGA AATGTGAACG ATCTCGATCC GTTTGTCCTG
AAAAGATCGG AAGCATACAT AGGCGTGCTT ATCGACGACC TCATTAACAA AGGCACCGAA
GAGCCTTACC GGATGTTCAC CTCCCGCGCC GAATACCGCA CATTGCTCCG CCAGGATAAT
GCCGATTTAA GGCTTACTGA AAAGGGATAC GAAATCGGAT TGGCGAGCGA CGAAAGGGTG
GAAGCCGTCC GAAAGAAGAA ACGTGAAACG GAAGAGGTCA TCGCCAAACT GAATGCTACC
AAGCTCACGC CCGACGAAAT CAATCCTGCA TTGGAAGCGA TCGGAACGGC GCAGATCCGT
GAGAAAATAG CCGTCGCGCA ACTGCTCCGG AGACCCCAGA TTTCCATCGA TCAACTGCTC
GAAGCAAGCG CGGTCGTGAC CGAATTGCTC GCTGAATACG CTAACGATTC TGTTCAGCAG
GCCGAAATCA ACCTCAAATA CGACAGCTAC ATTGAAAAGG AAATGCTGCT CGTGGATAAA
ATGAATAAGC TGGAAAACCT CGCGATCGTG GAGAATTTCA ACTACGACGG GGTCACTTCG
TTGTCCTTTG AAGGCCGTGA AAAACTGAAA AGAACACGTC CTTCGACGAT CGGCCAGGCG
TCCCGCATCA GTGGTGTCAG CCCTTCGGAT ATATCTGTTT TAATGCTTTA CATAGGCCGC
TAA
 
Protein sequence
MFQEYDVIVV GAGHAGCEAA AAAATMGSSV LLITMNMHTI AQMSCNPAMG GVAKGQIVRE 
IDALGGQSGI VSDKTMIQFR MLNLSKGPAM WSPRCQSDRV RFAEEWRSIL ENNPNVDFWQ
DTAKNIIVED GKVCGVVTSL GIQIRSKAVV LTNGTFLNGL IHIGEKNFGG GRTGEKSATG
LTEQLVTLGF EAGRMKTGTP PRVDGRSLDY SKMEEQPGDE VPAKFSYTDT KPLAKQRSCW
ITYTNQEVHD VLKTGFEKSP MFSGRIKGLG PRYCPSVEDK INRFADKDRH QIFVEPEGWD
TVEVYVNGFS TSLPEDVQYA ALRKIPGFEN AKMFRPGYAI EYDYFPPTQL KSTLETHLVK
NLFFAGQING TTGYEEAACQ GLMAGINAHR NVNDLDPFVL KRSEAYIGVL IDDLINKGTE
EPYRMFTSRA EYRTLLRQDN ADLRLTEKGY EIGLASDERV EAVRKKKRET EEVIAKLNAT
KLTPDEINPA LEAIGTAQIR EKIAVAQLLR RPQISIDQLL EASAVVTELL AEYANDSVQQ
AEINLKYDSY IEKEMLLVDK MNKLENLAIV ENFNYDGVTS LSFEGREKLK RTRPSTIGQA
SRISGVSPSD ISVLMLYIGR