Gene Dfer_3723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3723 
Symbol 
ID8227308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4532431 
End bp4533507 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content50% 
IMG OID644931555 
Productoxidoreductase FAD/NAD(P)-binding domain protein 
Protein accessionYP_003088093 
Protein GI255037472 
COG category[C] Energy production and conversion 
COG ID[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.571859 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAT ATTATTTTTT AAAAATAAAG GAGATAGAAA AAGAAACGGA GGAGGCTGCG 
ACCATCCATT TCTGGCACCC GATCAACGAA GTGGTTCAGT ATCGTCCGGG GCAGTTCCTG
ACATTGCTGC TGCCTTTCGA AGATAAAAAA ATCCGGCGGT CGTATTCGAT GTCGAGCTCG
CCTTATACCG ATGTTTCGCT GGCTATTACC ATTAAGCGCG TGCCGGGCGG CTATGCGTCC
AATCTTCTGC TCGATACGCT GAAAGAAGGC GACGTGCTCG AAACATTGGA GCCGATGGGC
CATTTTTTCC CCAAACAGGC CGACGACCAG ACGCGCCAGG TGGTGTTTAT CGGTGCAGGA
AGCGGCATTA CACCATTGTT TTCAATTCTG AAATCGGTTT TGATGGTGGA GCCGGAAAGT
GAAATTTTCC TGATTTACGG AAGCCGACGG GAAGACAGTA TTATTTTTAA AGACAAAATC
GCGGCGCTGG AAAATAAGTA TGGCAGGCGG ATCACGGTTG TGCACACATT AAGCCAGCCC
GGTGAAGGCT GGGAAGGCGA AACTGGCCGG TTGAACAAGA GCCACGTCCT TAAAATCATC
GAAAAGCTCC CTACGCTGAA CATCAAAGAA GCAGAATATT TCCTCTGCGG CCCCGAGGAT
ATGATGGAAG AATCGCATCG CGCGCTTTCC ATTCTCGCCG TTCCAGAGAG CAAAATCCGG
AAGGAGAGCT TCATTACCGC AACTTCCGCC AAGCCCGGCG AAGTGACCGT GGAGCCCGAA
GCAGAGGATG ATGATTCGCC CAAAACACGC GAAATCACGC TGTTTTACGA GGGTACGGAG
TATAAACTAC CCGTAAAGCC GCACGAAACA GTGCTCGAAG CCGCATTAAA TATGGACATT
GACCTGCCGT ATTCGTGCCA GGCGGGTATG TGTACGGCTT GTATGGGCCG GTGCACATCC
GGAAAAGTGC AAATGGATGA GGAGGATGCA CTTTCGGAGG CGGAAGTGAA TGAAGGATTT
ATCCTCACCT GCGTTACACA TCCGATGAGC GATGATGTGG TGATTGAGGT TGAGTGA
 
Protein sequence
MSKYYFLKIK EIEKETEEAA TIHFWHPINE VVQYRPGQFL TLLLPFEDKK IRRSYSMSSS 
PYTDVSLAIT IKRVPGGYAS NLLLDTLKEG DVLETLEPMG HFFPKQADDQ TRQVVFIGAG
SGITPLFSIL KSVLMVEPES EIFLIYGSRR EDSIIFKDKI AALENKYGRR ITVVHTLSQP
GEGWEGETGR LNKSHVLKII EKLPTLNIKE AEYFLCGPED MMEESHRALS ILAVPESKIR
KESFITATSA KPGEVTVEPE AEDDDSPKTR EITLFYEGTE YKLPVKPHET VLEAALNMDI
DLPYSCQAGM CTACMGRCTS GKVQMDEEDA LSEAEVNEGF ILTCVTHPMS DDVVIEVE