Gene Dfer_3659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3659 
Symbol 
ID8227244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4458594 
End bp4459460 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content50% 
IMG OID644931491 
Productmetallophosphoesterase 
Protein accessionYP_003088029 
Protein GI255037408 
COG category[S] Function unknown 
COG ID[COG2908] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.442865 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0716533 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGAAG CAACACACTT TCGGACTATC ATTATTTCTG ACATTCACCT CGGCGCAGGG 
GGCTCGAAGG CAGAAGAAGT CACCAATTTT CTGAAAAGCT ACACATGCAA AAAACTCATC
CTGAATGGCG ACATTATTGA TGCGTGGCAG CTGAAAAAAT ACGGTGTCTG GAAACGCAAA
CACACGCTTT TTTTCAAACG GGTGCTGAAA ATGATAGAGG ATAACAAGAC GAAAGTGGTC
TACATCCGCG GTAACCACGA CGATTTTCTC GACCAGATCA TCCCGCTCCG CCTCGGCAAG
CATTTCCAGA TCCGCAAGGA CTATGTGCTC ACATCGGGTA CCCAGCGGTT TTACGTTACC
CACGGCGATG TTTTCGACTC CATTACCACG CATTTGAAAT GGCTCGCCTA CCTGGGCGAT
ATCGGCTACA CGTTTTTGTT GTGGGTCAAT AAATTCTACA ATAAATACCG TGCATGGCGC
GGACTCTCCT ATTACTCCTT GTCGCAGCGG GTGAAACAGT CGGTGAAAAT GGCTGTCAAC
TACATGACCG ACTTTGAAGA GAAACTCACT GAACTCGCCC GTTCGCGCAG CTGCGACGGC
GTGATTTGCG GGCATATTCA CCACCCGGCC ATTCGGGAGA TCGACGGTAT CAAGTACATG
AATTCGGGCG ACTGGGTGGA AACACTGAGC GCATTGGTCG AAGACTTCGA TGGCAACTGG
AGCCTGCTTT ACTATGACCA GCAGGCGGCC ATTGAAAAAC CAGTTAAGAA AACCAGCACT
AAAAAAGTCG TTGAGAACTT CCCCGGCATC GAAAAGCAGG TGGCATTTAC CGGTTTCCTG
ACGGGGCGGA ACGAGCGCTA TCTTTAA
 
Protein sequence
MGEATHFRTI IISDIHLGAG GSKAEEVTNF LKSYTCKKLI LNGDIIDAWQ LKKYGVWKRK 
HTLFFKRVLK MIEDNKTKVV YIRGNHDDFL DQIIPLRLGK HFQIRKDYVL TSGTQRFYVT
HGDVFDSITT HLKWLAYLGD IGYTFLLWVN KFYNKYRAWR GLSYYSLSQR VKQSVKMAVN
YMTDFEEKLT ELARSRSCDG VICGHIHHPA IREIDGIKYM NSGDWVETLS ALVEDFDGNW
SLLYYDQQAA IEKPVKKTST KKVVENFPGI EKQVAFTGFL TGRNERYL