Gene Dfer_3647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3647 
Symbol 
ID8227232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4445483 
End bp4446130 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content43% 
IMG OID644931479 
Productprotein of unknown function DUF820 
Protein accessionYP_003088017 
Protein GI255037396 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0651314 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAATC GTATCGTTTC GGAAATCATG AACGTGCCGG ATGCATATCT GGTGCTGGAA 
GCGGTGCAAA AAGCGCTTGA TGAAGAGCGG AAGCGGCGGT TGAAATTTTA TAATGACATT
ACGGAGCAGG AGAAAATCGA ATTCATTAAT GGAGAAATTG TAACGCATTC TCCCGCAACG
TACAAGCATG GTAAAATCAG CGGTCTGTTA TATACCGCCC TTTCGTTGCA TGTGCGGAAG
AATGCGCTGG GCTTCGTAGG ATACGAGAAA ATAATGATCT CATTATCCCG AAATGACTAC
GAGCCGGACA TTTGCTTTTT TAATAATGAA AAATCAAAAG AATTTGCCGA TGACAAAATG
TTTTTTCCGA CACCGGATCT GGTAATTGAG ATAATTTCTC CATCTACGAA ACTGCGTGAT
CGTGGAGTCA AATTCAAGGA TTACCAGGCA CATGGCGTAA ATGAATATTG GATCATTGAC
CCGAGTGATG ACACATTGGA GCAATATCAC CTTTTCGGCG AGGAATATCA GTTGATACTC
AAATCTGCTG TCGGCGACGT CAAAAGCTTC GCAGTGGACG GCTTCCAAAT CCCCATCCGT
GCCATTTTCG ACGATGATGA AAATCTGAAA GCCATCCAAA ATCTATAA
 
Protein sequence
MSNRIVSEIM NVPDAYLVLE AVQKALDEER KRRLKFYNDI TEQEKIEFIN GEIVTHSPAT 
YKHGKISGLL YTALSLHVRK NALGFVGYEK IMISLSRNDY EPDICFFNNE KSKEFADDKM
FFPTPDLVIE IISPSTKLRD RGVKFKDYQA HGVNEYWIID PSDDTLEQYH LFGEEYQLIL
KSAVGDVKSF AVDGFQIPIR AIFDDDENLK AIQNL