Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3629 |
Symbol | |
ID | 8227214 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 4423639 |
End bp | 4424757 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644931461 |
Product | DegT/DnrJ/EryC1/StrS aminotransferase |
Protein accession | YP_003087999 |
Protein GI | 255037378 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATACA AGATTTACCT CTCACCCCCG CACATGAGCG GGCGGGAGCA ACAATACGTC CGCGAGGCAT TCGACAGCAA CTGGATTGCA CCCGTGGGCC CGAATATCAA TGTGTTCGAG GAGGAGTTAT GTGCATATAC GGGCAGCAAG CATGCGCTCG CGCTGGCATC CGGCACGGCG GCGCTGCATC TTGCATTGCT GGCGTTGGGG ATCGGGCTGA GCGACGTCGT CCTTTGCCAG TCACTCACGT TCGTGGCCAC TGCCAATCCG ATCGTGTACG TGGGCGCGAC GCCCGTTTTT ATCGATAGCG AGCCGGTGAC CTGGAATATG TGCCCCAATG CACTGGAAGA TGCCATCCGG CATTACATCC GGATCGGGAA AAGGCCTAAG GCCATCATCG TCGTGCATTT ATATGGAATG CCTGCTATGC TGGATGAAAT TCTGTATTTG TGCAAAAAGC ATGACATTCC GCTAATCGAG GACGCGGCCG AAGCGCTGGG TGCGGAATAT GGCGGCAGCA AGGTCGGTAC TTTCGGTACG ATCGGGATAT TTTCCTTCAA TGGAAACAAA ATAATCACGA CGTCCGGCGG CGGTGCGATG GTTTCCATTT CCCCTGAATA CCTGGAAAGA GCCCGGTTCC TGGCCACGCA GGCGCGGGAG CCGTCACGGC ATTACGAGCA TCATGAAGTA GGATACAATT ATAGGATGAG CAATGTGTGC GCCGGAATAG GGCGTGGGCA ATTGGAGGTG ATCGATGAAA GAGTTGCGCA GCGCCGGTCA AACTTTCAGT TTTATCAACA TTATTTCGAA GGTATTGCTG AAATCGGCTT TCAAACGGGC ATTGCCGAGA CTTTTTCCAA CCGCTGGCTG ACGGCGCTCG TCATTGAGGG CAACCGTGCC AGTCCTGCCG ACATTCAAAC TGCGTTGCTG GCGCATGGCA TCGAATCGCG TCCGGTGTGG AAACCAATGC ATTGCCAGAA AATATACGAA ACGCTACCCC GGTTTGGAGG TAGCGTTTCG GAAAGATTGT TCGAGCGGGG AATGTGCCTG CCGTCCGGTT CAAATCTCGG TGAAGCCGGG CGGGAGCTGG TAGCCCGCAT CGTCAGAAGT TGTTTTTGA
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Protein sequence | MEYKIYLSPP HMSGREQQYV REAFDSNWIA PVGPNINVFE EELCAYTGSK HALALASGTA ALHLALLALG IGLSDVVLCQ SLTFVATANP IVYVGATPVF IDSEPVTWNM CPNALEDAIR HYIRIGKRPK AIIVVHLYGM PAMLDEILYL CKKHDIPLIE DAAEALGAEY GGSKVGTFGT IGIFSFNGNK IITTSGGGAM VSISPEYLER ARFLATQARE PSRHYEHHEV GYNYRMSNVC AGIGRGQLEV IDERVAQRRS NFQFYQHYFE GIAEIGFQTG IAETFSNRWL TALVIEGNRA SPADIQTALL AHGIESRPVW KPMHCQKIYE TLPRFGGSVS ERLFERGMCL PSGSNLGEAG RELVARIVRS CF
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