| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3611 |
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| Symbol | gatB |
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| ID | 8227196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4408321 |
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| End bp | 4409811 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644931445 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | YP_003087983 |
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| Protein GI | 255037362 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCAAA CCGCCATTCA ACCCGCCGAC GTTACCGATG AACTTCTGGC CACTTATGAA
ACTGTAATAG GGCTTGAAGT GCATTGCCAG CTTCAGACGG AATCCAAGCT GTTTACCCGC
GATTTCAACA TTTTTGGCAC TGAACCCAAC ACCAATATCG GTCCGCTTAC GATCGCATTG
CCGGGGACTT TGCCCAAGGT CAATAAAAAG GCTGTCGAAT ATGCCATCCG CCTCGGCATT
GCCTGCGGAT GCTCCATCAG CAAAAGGACC ATTTTCGACC GCAAAAATTA CTTCTACCCC
GATCTTCCGA AAGGTTACCA GATCTCGCAG GACAAAAAAC CGATCTGCGA GCAGGGCGGC
GTGCATATTT CGTTCAAGCA CGACGGCAAG TTCACGGAAA AAACCATTCG TTTTCACCAT
ATCCATTTGG AAGAAGACGC CGGAAAATCG GTGCACGACG GCAGCCATAC CGAAACCATG
CTCGACTACA ACCGCGCCGG CACTCCGCTC CTGGAAATGG TATCGGAACC GGATCTGCGC
TCTGCCGAAG AAACAGGGGC ATTTGTGACT GAAATCCGCC GGCTGGTGCG CTACCTGGGC
ATCAGCGACG GCAATATGGA AGAAGGTTCA CTGCGTGCGG ACGTGAACGT GTCGGTGCGC
AAGCACGGCG CAGCGCAGTA CGGGACAAAG GTCGAGATCA AAAACATGAA CTCGATCCGC
AACATGATGC GCGCCATCGC ATTCGAGGAA CGACGCCAAA TAGCCATGCT CGAAAACGGC
GAGACGATCC AGCAGGAAAC CCGAATGTTC GACGTGGACA GTGGCCAGAC TTACGGCATG
CGCGTGAAGG AGACGATGAA CGACTACCGT TACTTCCCCG ATCCCGATCT GAGCCCGGTG
GTGGTTTCGG ACGAATGGCT GGAAAGCATT CAGGCAAGCA TGCCCGCATT GCCGCATGAG
CTGCGCGAAA AATTTGTGAC TCAATACGGT ATCCCGGCCT ACGACGCCGC GGTGCTGACC
GATACCCGCG AACTGGCTGA GTATTTCGAA GCCGTTTGCG CCCAGACGAC GCATTTCAAG
GCCGCATCGA ACTGGCTGAT GGGCCCGGTG AAGTCATACC TCAACGACCA CCACGGCGAC
ATCGCCCATT TCCCGATCAG CGCGCAGCAC CTGGCCGATC TGATCGAGCT CAACGAGTCG
GGTGCGGTGA GCCATTCGGT GGCCGCACAG AAGATTTTTC CGGTGATGCT TGCGGAGCCG
GAACGTGCGC CGTCGGAGAT CGCGGAGTCA AATAACTGGC TGCAAAACAG CAATACGAAC
GAGCTTGAAA CGTTGGTAAA TGAGGTGATC GGCGCTATGC CCGACAAGGT TGCAGCATAC
CGGAAAGGCA AAAAAGGATT GATGGGATTG TTCGTGGGCG AGGTAATGAA GAAATCGAAC
GGAACGGCCG ATCCCAAGCT TGTCAACCAG TTGCTCGCAC AGAAACTGTA A
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| Protein sequence | MSQTAIQPAD VTDELLATYE TVIGLEVHCQ LQTESKLFTR DFNIFGTEPN TNIGPLTIAL
PGTLPKVNKK AVEYAIRLGI ACGCSISKRT IFDRKNYFYP DLPKGYQISQ DKKPICEQGG
VHISFKHDGK FTEKTIRFHH IHLEEDAGKS VHDGSHTETM LDYNRAGTPL LEMVSEPDLR
SAEETGAFVT EIRRLVRYLG ISDGNMEEGS LRADVNVSVR KHGAAQYGTK VEIKNMNSIR
NMMRAIAFEE RRQIAMLENG ETIQQETRMF DVDSGQTYGM RVKETMNDYR YFPDPDLSPV
VVSDEWLESI QASMPALPHE LREKFVTQYG IPAYDAAVLT DTRELAEYFE AVCAQTTHFK
AASNWLMGPV KSYLNDHHGD IAHFPISAQH LADLIELNES GAVSHSVAAQ KIFPVMLAEP
ERAPSEIAES NNWLQNSNTN ELETLVNEVI GAMPDKVAAY RKGKKGLMGL FVGEVMKKSN
GTADPKLVNQ LLAQKL
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