Gene Dfer_3568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3568 
Symbol 
ID8227153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4360888 
End bp4361379 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content59% 
IMG OID644931403 
Product2-amino-4-hydroxy-6- hydroxymethyldihydropteridin epyrophosphokinase 
Protein accessionYP_003087941 
Protein GI255037320 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 
TIGRFAM ID[TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.97478 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.319662 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCAA CCGGCCAGGT TTTTCTTCTG CTAGGCTCCA ACCTCGGCGA TCGCCCGCAG 
GTGCTCGCAA GCGCCCGCGA GGCCATTGCA GCGCAGGCGG GGACCATCAC CGGGCAATCG
GGCATTTATG AAACCGAACC GTGGGGCATC ACCGACCAGC CGTCATTCCT GAACCAGGTC
CTCGAAATCT CCACTTCCCT CCTGCCTGAG GACTTACTCA GAATCATTCT CAACATCGAA
CATGACCTCG GACGCGTGCG CTACGAGCGC TGGGGCGCAC GGGTGATCGA TATCGATATG
CTCTATTTCG GCACCACCGT CATAGACAGC GCCCGGCTTA CGGTACCGCA CCCGCGCATT
CAGGACCGCC GTTTTGTGCT TGCGCCGCTC GCTGAAATCG CGCCGCGCTT TACTCACCCG
CTTTTGCAAA AAACCTCCGC CCAGCTCCTC GACCAATGTC CCGACGACTC TGCTGTTTCA
AAAATATCTT AA
 
Protein sequence
MAATGQVFLL LGSNLGDRPQ VLASAREAIA AQAGTITGQS GIYETEPWGI TDQPSFLNQV 
LEISTSLLPE DLLRIILNIE HDLGRVRYER WGARVIDIDM LYFGTTVIDS ARLTVPHPRI
QDRRFVLAPL AEIAPRFTHP LLQKTSAQLL DQCPDDSAVS KIS