| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3543 |
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| Symbol | |
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| ID | 8227128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 4331715 |
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| End bp | 4332938 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644931378 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_003087916 |
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| Protein GI | 255037295 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.217876 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACTT TCAATATCCC CGATTTTTAC CGGAGCCGCA TTATCACGCC GATCAAGGAA
TTCCGTCGTA AAAACGACAA GCTGAAAAGG GACTATTCGC CCACTGTGCT CGATTTCGGG
CCGGTTCAGT TCCTGATCGC GCGGCATTTC GGGTTTTGTT ACGGGGTGGA GAATGCGATC
GACATTGCCT ACAAAGCCAT TGCCGAGAAC CCGGGCAAGC GGATCTTTTT GCTCAGTGAA
ATGATCCATA ACCCCGATGT GAACCGCGAC CTGGTAGAGC GCGGCGTGCA GTTTATCATG
GATACCAAAG GCAACCAGCT CATCGGCTGG GATCAGCTCA CGGCAGAGGA TATAGTGATC
GTCCCGGCAT TCGGGACGAC GGTCGAAAAC CAGGCGAAGC TCTCCGAATT GGGCGTGAAT
GCGTATGTGT ACGACACGAC TTGCCCGTTT GTGGAAAAGG TCTGGAACCG CGCCGCACAA
ATCGGCGAGA AGGATTACAC CATCGTGGTA CACGGAAAGC CGAATCATGA GGAAACCCGC
GCTACCTTCT CGCACAGCAA GGAAAATGCC CCGACAGTGG TGGTCGAAAA CATGAAGCAG
GCGCAAATCC TGGCCGAATA CATGACAGGA ATAAGACTTG CGGCGCAGTT TTTCGAAGAT
TTCAAAAACC AGTATTCCGA AGGTTTTGAC CCTGAAAAAG ACTTACAGCG CATCGGCGTC
GTGAACCAGA CCACTATGCT GGCATCCGAC ACACAAGGCA TCGCCGATTA CCTCAAAAAC
GTCATGATCC GCCATTACAG CCTGCGTCCC GAGCAGGTGG AGGACCGTTT CGCCAACACC
CGGGACACTT TGTGCTACGC CACAAACGAT AACCAGGATG CAACCTACGC ATTGCTCACG
CACGACGCCG ACCTGGTGGT AGTGGCAGGC GGTTATAACA GTTCCAATAC TACGCATTTG
GTAGAGTTGT GCGAACGGAA ATTCCCGACC TACTTCATCG AGTCGGTCAA TAAAATCCTG
GACAGACAGC TGATCCGTCA TTTCGACCTG CATAAAAAGG AAGAAGTGGT TACCGAAAAC
TACATTCCAG ACAAAACGCC CGTGCGCATT ATGCTCACCT GCGGCGCATC ATGCCCTGAC
GCCGTCGTGG AGGGAATCCT GGTGAGGCTG CTCTCATTTT TCGAAGGCGC GAGGCCGATC
GAGGAGGTGA TGGAGGCATT TTGA
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| Protein sequence | MKTFNIPDFY RSRIITPIKE FRRKNDKLKR DYSPTVLDFG PVQFLIARHF GFCYGVENAI
DIAYKAIAEN PGKRIFLLSE MIHNPDVNRD LVERGVQFIM DTKGNQLIGW DQLTAEDIVI
VPAFGTTVEN QAKLSELGVN AYVYDTTCPF VEKVWNRAAQ IGEKDYTIVV HGKPNHEETR
ATFSHSKENA PTVVVENMKQ AQILAEYMTG IRLAAQFFED FKNQYSEGFD PEKDLQRIGV
VNQTTMLASD TQGIADYLKN VMIRHYSLRP EQVEDRFANT RDTLCYATND NQDATYALLT
HDADLVVVAG GYNSSNTTHL VELCERKFPT YFIESVNKIL DRQLIRHFDL HKKEEVVTEN
YIPDKTPVRI MLTCGASCPD AVVEGILVRL LSFFEGARPI EEVMEAF
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