| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3526 |
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| Symbol | |
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| ID | 8227111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4306105 |
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| End bp | 4308510 |
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| Gene Length | 2406 bp |
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| Protein Length | 801 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644931361 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding |
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| Protein accession | YP_003087899 |
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| Protein GI | 255037278 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.747607 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGTT CCATTCGTAA AGTAGCTGTT CTTGGTTCAG GCATTATGGG CTCGCGCATT
GCGTGCCATT TTGCCAATAT AGGCGTGGAA GTGCTCTTGC TGGACATTGT GCCGAAAGAC
CTCACCGACG CCGAAAAAGC AAAAGGCATC ACCGCCGATC ACACCGCGTT CCGCAACCGG
ATCGTGAACG AATCGTTCCA GGCGACGCTC AAAGCCACAC CGGCCTCGCT GTACAGCCCG
GCATTCGCCT CGCGGATCAA GCTCGGCAAC TTCGACGATA ATCTGGCCGA CATCAAAAAC
TACGACTGGG TGATTGAGGT GGTGGTGGAA AGGCTGGATA TCAAGAGAAG CCTTTACGAA
AAAGTGGACG CGCTCCGCAA GCCGGGCACG CTCGTTACCT CCAATACTTC GGGCATTCCG
ATCCATTTAA TGGCCGAGGG CCGGAGCGAA GATTTCCGCA AAAACTTCGC TGGAACGCAC
TTTTTTAACC CTCCGCGCTA CCTGCGCCTG CTCGAAATCA TCCCCACCGC GGACACCGAC
CAGAGTGTGG TCGATTTCCT GATGCATTAC GGCGAGCTGT TTTTAGGCAA AACCACCGTG
CTCTGCAAGG ATACGCCGGG CTTTATTGCT AACAGATTAG GCATTTACGC ATTGATCCAA
ACCATCCGCG TGGCCGAAGA AATGGGCCTC AGCGTGGATG AAGTGGATAA ATTGACCGGC
CCGGTTGCCG GGCGGCCGAA ATCGGGCACT TACCGGCTTT CGGATGTGGT AGGACTTGAC
ACGACCGTGC ATGTGGCGAA CAATTTGTAC GCTTCCGGCG AGGGCAAGGA TGAATCGCGG
GATGCATTTG TGCTGCCGGA GATCATGCAA AAGCTGTTTG ACAACAAATG GCTGGGAGAT
AAAACGGGTC AGGGTTTTTA CAAAAAAATT AAGGACGAAA AAGGCAAGTC GGTGATCCTG
GCGCTGGATT TCAAGACTTT GGAATACGTG CCGTCGGGCA AAGTAAAGTT TGAAACGCTG
GAAGGCACGA AGAACATCAG CGACGTGCAG AAACGCTTTG CCGCATTGGT GGCGGGCAAG
GACAAGGCCG GCGATTTTTA CCGAAAGACA TTCGCCGACA TTTTCAAATA CGCTACATTC
CGCATTCCGG AGATATCAGA CGAGATTTTC CGCATCGATC AGGCCATTAC CGCGGGCTTC
GGCTGGCAAT ACGGCTTATT CGAGACCTGG GACGCCATTG GCTTGAAAGA CATGCTGAAG
ATCATGGAAT CGCTCGACCT GAAACCTGCT CAATGGGTTT ACGAAATGCT TTCGGCAGGC
CATGAGTCAT TTTATAAAGT GGAGAATGGG AAGCGGTTGT ATTATGACAT TCCTTCCAAA
TCCTACAAGC GCATCCCGGG CCAGGACAGC TTCATTTTGC TGAGCAACCT TTCCAATAAC
ATTGTATGGA AAAACGCCGG CGCGAACGTC TACGACATCG GCGACGGCAT CCTGAACCTC
GAATTCAAAT CTAAAATGAA TACGATGGGC GCGGAGGTGA TCGAGGGTAT TCAGAAAAGC
ATTAGTCTGG CGGAGAAGGA TTTCCGCGGG CTGGTGATCG GCAATGAGGC GGTGGAAGCA
TTTTCGGCCG GAGCGAACCT CGCAATGCTG TTTATGTATG CCGTGGAGCA GGAGTTTGAT
GAGATTAACC TGGTCATTTC ACAGTTCCAG CAAACGATGA TGCGGGCGCG GTACTCATCG
GTGCCGGTGG TGGTGGCGCC TCACACGCTT GCGCTCGGGG GCGGCTGCGA GCTTACCCTG
CATGCGGATA AGGTGGTGGC GCACGCGGAA ACCTACATCG GGCTGGTCGA ATTTGGCGTG
GGGCTGATTC CCGCCGGCGG CGGTACCAAG GAAATGGCGC TGCGTTGCTC GGATATGTAC
CAGGCCGGCG ATCCCGAGCT GAACATCCTG CAAAATGCGT TTATGAACAT CGCGCAGGCG
AAAGTGTCCA CATCGGCGCA CGAGGCGAAG GCGATGAATT ATTTGCAGGA CAAAGACCAG
ATCGTGCTCA ACCGCTCACG GCTCATCGCC GAAGCCAAGC AGGCAGCGAT CGACCTTGCG
GAAAATGGCT ACACGCAGCC CAAGCCGCGT TTCGAGATTA AAGTACAAGG CAAAACCGGC
ATTGCATTGT TCCTCGCGGG CATTACCCAA ATGCGCCTCG CGAACTACAT CAGCGATCAC
GATGCTAAGA TTGCCGGCAA ACTCGCTTAT GTGATCAACG GCGGCGATCT GAGTTACCCG
CAGCTGGTTT CGGAACAATA CCTGATCGAC CTCGAACGCG AAGCATTCCT TTCGCTTTGC
GGTGAGAAAA AGACGCTGGA ACGAATGCAG GGACTGCTAA ATGGCGGCAA ACCGCCGAGA
AACTGA
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| Protein sequence | MNRSIRKVAV LGSGIMGSRI ACHFANIGVE VLLLDIVPKD LTDAEKAKGI TADHTAFRNR
IVNESFQATL KATPASLYSP AFASRIKLGN FDDNLADIKN YDWVIEVVVE RLDIKRSLYE
KVDALRKPGT LVTSNTSGIP IHLMAEGRSE DFRKNFAGTH FFNPPRYLRL LEIIPTADTD
QSVVDFLMHY GELFLGKTTV LCKDTPGFIA NRLGIYALIQ TIRVAEEMGL SVDEVDKLTG
PVAGRPKSGT YRLSDVVGLD TTVHVANNLY ASGEGKDESR DAFVLPEIMQ KLFDNKWLGD
KTGQGFYKKI KDEKGKSVIL ALDFKTLEYV PSGKVKFETL EGTKNISDVQ KRFAALVAGK
DKAGDFYRKT FADIFKYATF RIPEISDEIF RIDQAITAGF GWQYGLFETW DAIGLKDMLK
IMESLDLKPA QWVYEMLSAG HESFYKVENG KRLYYDIPSK SYKRIPGQDS FILLSNLSNN
IVWKNAGANV YDIGDGILNL EFKSKMNTMG AEVIEGIQKS ISLAEKDFRG LVIGNEAVEA
FSAGANLAML FMYAVEQEFD EINLVISQFQ QTMMRARYSS VPVVVAPHTL ALGGGCELTL
HADKVVAHAE TYIGLVEFGV GLIPAGGGTK EMALRCSDMY QAGDPELNIL QNAFMNIAQA
KVSTSAHEAK AMNYLQDKDQ IVLNRSRLIA EAKQAAIDLA ENGYTQPKPR FEIKVQGKTG
IALFLAGITQ MRLANYISDH DAKIAGKLAY VINGGDLSYP QLVSEQYLID LEREAFLSLC
GEKKTLERMQ GLLNGGKPPR N
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