Gene Dfer_3497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3497 
Symbol 
ID8227082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4276507 
End bp4276959 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content45% 
IMG OID644931334 
Productribosomal protein L13 
Protein accessionYP_003087872 
Protein GI255037251 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0102] Ribosomal protein L13 
TIGRFAM ID[TIGR01066] ribosomal protein L13, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.46493e-06 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.686311 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTAATCG TGGATACGTT AAGCTACAAA ACCATCTCGG CGAACAAAAA CACAGTAAAC 
AAGGAGTGGA TTGTTGTGGA TGCTGAAAAT GCAGTTCTTG GTCGTCTGGC CAGCGAAGTT
GCTAAAATTA TCAGAGGCAA ACACAAGGCA AGCTATACTC CTCATGTGGA TTGTGGTGAT
AACGTTATCG TTATCAACGC CGATAAGATC AAGTTGACAG GTAAGAAGAT GTCGGACAAA
ATTTACGTTC GTCACACCGG CTACCCAGGA GGTCAACGTT TTCAGACTCC TCGCGAGTTG
CTCGAAAAAC ACCCTGAGCG TGTGATCGAG AAAGCCGTAA AAGGCATGCT TCCAAAGAAC
CGTTTGGGAC GTCGTTTATT TACAAACCTG TTTGTTTACG CTGCCGCAGA ACACCCGCAC
AGCGCACAGC AACCAAAGCA AATCCAATTG TAA
 
Protein sequence
MLIVDTLSYK TISANKNTVN KEWIVVDAEN AVLGRLASEV AKIIRGKHKA SYTPHVDCGD 
NVIVINADKI KLTGKKMSDK IYVRHTGYPG GQRFQTPREL LEKHPERVIE KAVKGMLPKN
RLGRRLFTNL FVYAAAEHPH SAQQPKQIQL