| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3420 |
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| Symbol | |
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| ID | 8226999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 4180171 |
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| End bp | 4181562 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644931251 |
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| Product | peptidase S41 |
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| Protein accession | YP_003087795 |
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| Protein GI | 255037174 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000000174493 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAA GAATTTTCCT GCCTGTCATT TTGCTGGTCG CATTTGCTTT TTCGTGTAAA
GAGAAAAATG CAGAGCCCAA GAACGAAACA GAAACCAACC AGTGGATTTA TGCCAACATG
AAATATTGGT ACTACTGGAC GGACCAGATC ACCGCATCGC CCGACTACAA CAAAACGCCC
GGCGATTTTT TCAACTCCCT GCTCTATAAA TATGACGCAA CGGCCCGCCC GGACGGCGAC
CGGTTCTCAT GGATGCAGGA AAGCGCGAAA GAACTCGAAG CATCGCTCGG AGGCGAATCG
AAAACGAGTG GGATGGAGTA CAAGCTGGTG TATTTTCCGG CCAATACCAG TAATGTGGTA
GGCGTCGTAC TATATGTGAT TCCCGGCTCT CCGGCCGCGC AGGCGGGCCT CGTGCGGGGC
GACGTGTTCA GCAGTGCCAA CGGCCAGAAA CTGACGGACG CCAATTATTC GAAGCTGTTA
AACACGGAAA ACAAAACTTC CTACACCCTC GCGGACATCA AGGACGGCAC CTTGAAAGAG
ACCGCCACCG TCAGAGAAGT AACGCCCATA GTATTGCAGG AAGATCCCGT GTTTTTTGAC
ACCGTTTACA CCATCGGGGC CGATAAAATC GGTTATGTCG TTTACCATCA GTTTATTCCG
GAGCCATTCA AAGCGAATAA CCAGGCTTAT GACAAGAAAC TGGACGGCAT TTTTTCTGAA
TTTAAAAACA GCAATATCAA TGCGCTGGTG GTCGATTTTC GCTATAATCC GGGTGGTTAT
GTGAGCTCAG CAACGAACCT GGCGAGCCTC ATCGGCAAAG TCTCGGCCAA TGACATTTTC
TATTACAAAG AATACAACAA GCAGGTCACC GAAACGAACC TGAAAAAATA CGGCGAATCG
TATTTCTACG ATAAGTTTAC CGCCAAAGCG CAGAATGTAG GCAGCAATCT GAAAGAGCTG
GTATTTCTGG TATCGTCGCG CTCGGCTTCT GCCAGTGAGC TGGTGATCAA CGGATTAAAG
CCATTTATGA ATGTGACGCT GGTGGGTGGC AGGACAGTCG GCAAGAATGT AGGCTCGGTG
ACGATCAGTG ATGAAAAGAA AGGCATTAAA GTTGGCCTGC AACCCATCGT TTCGAAATCA
TTGAATAAGG ACAAAAAATC GGATTACCAT GTTGGTTTCG AGCCGGATGT GAAGGTGAGC
GAGGGCAATA TCCTGTTTCC TTACGGCGAT CCGCGCGATC CGCTGCTGGG CGAGGCGCTG
TTCCGGATAA CGGGCACGCA TGTGGTGCGG CAGGCCCGGA ACGCCCGCGT ATTGCAGGAA
GAAGAGGCCA ACGAACTGGT GTCAACGATC AGTCGCAAGG CGGGCGGCAG CAATATGTTC
TTCGACAAAT AG
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| Protein sequence | MKRRIFLPVI LLVAFAFSCK EKNAEPKNET ETNQWIYANM KYWYYWTDQI TASPDYNKTP
GDFFNSLLYK YDATARPDGD RFSWMQESAK ELEASLGGES KTSGMEYKLV YFPANTSNVV
GVVLYVIPGS PAAQAGLVRG DVFSSANGQK LTDANYSKLL NTENKTSYTL ADIKDGTLKE
TATVREVTPI VLQEDPVFFD TVYTIGADKI GYVVYHQFIP EPFKANNQAY DKKLDGIFSE
FKNSNINALV VDFRYNPGGY VSSATNLASL IGKVSANDIF YYKEYNKQVT ETNLKKYGES
YFYDKFTAKA QNVGSNLKEL VFLVSSRSAS ASELVINGLK PFMNVTLVGG RTVGKNVGSV
TISDEKKGIK VGLQPIVSKS LNKDKKSDYH VGFEPDVKVS EGNILFPYGD PRDPLLGEAL
FRITGTHVVR QARNARVLQE EEANELVSTI SRKAGGSNMF FDK
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