| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3390 |
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| Symbol | |
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| ID | 8226969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4146073 |
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| End bp | 4147395 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644931221 |
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| Product | signal recognition particle protein |
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| Protein accession | YP_003087765 |
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| Protein GI | 255037144 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.202247 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGAAA ACTTACAGGA CAAGCTTAAT AACGCCTTTC GCACACTAAA AGGAAAGGAC
AGGATATCCG ATATAAATGT TGCCGCCACC ACCAAGGAAG TCCGCAAAGC GCTGGTTGAT
GCCGACGTAA ACTTCAAGGT AGCCAAAGAA ATTACAGACC GCATCCGTGA AAAGGCCATC
GACAGAAAAA TCCTGATTTC TGTTGAACCC GGGCAGATGT TTGTCAAAAT CGTGCAGGAA
GAGCTCACTG AACTGATGGG CGGCAATGCC GAGGGGATCA ATATCAAAGG CGACCCCGCG
GTGATCCTGA TCGCCGGTTT GCAAGGTTCC GGTAAAACCA CATTCTCCGG AAAACTCGCT
TCATTACTAA AAAAACAAGG GCGCCAGGTA CTTTTGACTG CCTGCGACGT GTACCGCCCT
GCGGCGATCG ACCAGCTGAA AGTGCTCGGA GAGCAGATCG GCGTGGAGGT ATATTCTGAG
CCTGAGAACA AAAATGCGGT AAGCATTGCG CAGAACGCGG TGTCGCACGC TAAAAAATCC
GGCAAAAAGA TCGTGATCGT CGATACGGCG GGCCGTTTGG CAGTGGACGA GGTGATGATG
AAAGAGGTGG AAGACATTAA AACTTCCGTA AAACCTTCCG AAATCCTCTT CGTAGTCGAC
TCGATGACCG GTCAGGACGC GGTGAACACG GCTAAAACCT TTAACGAAAG ACTTGATTTC
GACGGTGTAG TACTTACCAA ACTCGACGGT GACGCCCGCG GTGGTGCGGC GCTTTCGATC
CGCCAGGTGG TCGAAAAACC GATCAAATAC ATCAGTACCG GGGAAAAAAT GGAAGCGCTC
GACTCCTTCT ACCCCGATCG TATGGCAAGC CGGATCCTCG GCATGGGTGA CGTGATCTCC
CTCGTGGAAC GCGCACAGCA GGCATTCGAC GAAGACGAGG CAAAGCGCAT TAACGCCAAA
ATGCGTCAGA ATAAATTCGA TTTTGACGAC TTCCTCGGCC AATTGCAGCA GATCAAAAAG
ATGGGTAACG TAAAAGACCT CATCGGAATG ATTCCGGGCA TGGGCTCAGC CATTAAGAAC
CTCGATATCG ACAACGAATC GTTCAAACCC ATTGAAGCGA TCATTCAGTC GATGACCAAA
AAAGAACGCG AGAACCCCGA TATCATCGAC GGCAGCCGCA AAAAACGCAT TGCAGCCGGT
AGCGGCACCA CCATTCTGCA AGTCAACAAC CTGATCAAAC AATTTGATGA AATGCGGAAA
ATGATGAAAA AAATGAATAC CATGCAGGCG GCCGGCAAGC TTGGCAAAGC AATGCGCCGC
TAA
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| Protein sequence | MFENLQDKLN NAFRTLKGKD RISDINVAAT TKEVRKALVD ADVNFKVAKE ITDRIREKAI
DRKILISVEP GQMFVKIVQE ELTELMGGNA EGINIKGDPA VILIAGLQGS GKTTFSGKLA
SLLKKQGRQV LLTACDVYRP AAIDQLKVLG EQIGVEVYSE PENKNAVSIA QNAVSHAKKS
GKKIVIVDTA GRLAVDEVMM KEVEDIKTSV KPSEILFVVD SMTGQDAVNT AKTFNERLDF
DGVVLTKLDG DARGGAALSI RQVVEKPIKY ISTGEKMEAL DSFYPDRMAS RILGMGDVIS
LVERAQQAFD EDEAKRINAK MRQNKFDFDD FLGQLQQIKK MGNVKDLIGM IPGMGSAIKN
LDIDNESFKP IEAIIQSMTK KERENPDIID GSRKKRIAAG SGTTILQVNN LIKQFDEMRK
MMKKMNTMQA AGKLGKAMRR
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