Gene Dfer_3386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3386 
Symbol 
ID8226965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4142675 
End bp4143259 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content46% 
IMG OID644931217 
Productprotein of unknown function DUF820 
Protein accessionYP_003087761 
Protein GI255037140 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.127932 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATTCAG AAGAGGAATA TCTCCGCCTT GAAAACGACG CCTTTGAAAA GAGCGAATAT 
TTTCAGGGGC AGATCATTAA AATGTCGGGT GCGGCACCGA ATCATAATCG GGTAAAGGAG
AATGTGATCG GGGAAATTTA TCAGGTTTTG AAAAAGAACA AATCCTGCCG AAGCTCATCC
AGTGACCAGC GCATTCATAT TCCCGCCAAT TCACTGTACA CTTATCCCGA CATTGTGATT
GTCTGCGGGG CTAACCAGTT TTCAAAGCTT GATCGCATCA CGATTATTAA CCCGTCGGTA
ATTATTGAAA TTCTTTCCCC ATTCACCTGC GAGTACGACC GCGGGCAGAA ATTCAAATTG
TACCGTGACA TTGAAACCTT GCAGGAATAT GTGACGATAG ATTCCCGTAA AGCCGACGCG
CAGGTTTTCC GCCGTATGCC CGGTAATCAA TGGATACTGG CCGATGATGC ATTCTCCCTG
ACCGAAACAA TTACAATTCA AACCATTGGC GCAACCCTGC AAATGGCCGA TCTTTATGAC
GGCACCGAGA ATGTAACCAG CCTCGTTCCC CCACCAAAAG AGTAA
 
Protein sequence
MYSEEEYLRL ENDAFEKSEY FQGQIIKMSG AAPNHNRVKE NVIGEIYQVL KKNKSCRSSS 
SDQRIHIPAN SLYTYPDIVI VCGANQFSKL DRITIINPSV IIEILSPFTC EYDRGQKFKL
YRDIETLQEY VTIDSRKADA QVFRRMPGNQ WILADDAFSL TETITIQTIG ATLQMADLYD
GTENVTSLVP PPKE