Gene Dfer_3374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3374 
Symbol 
ID8226953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4128829 
End bp4129836 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content53% 
IMG OID644931205 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_003087749 
Protein GI255037128 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0492] Thioredoxin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACATTT ACGACGCAAT CATAATCGGC GGCGGCCCGT GCGGCCTCGC AATGGGGGTG 
GAGCTGGCCA AAAGCGGGCT CGACTACCTG ATCCTCGAAA AAGGCAACCT CACCGAATCC
ATCCGCCGGT ACCCGCGGCG CATGAAATTC TTCTCTACCG CTGAAAATAT CGAAATAGGC
GGCATTCCGT TCGCGATTTC CGACGTGAAG GCCAACCGCA ACGAAGCCCT GCAATATTAC
CGCAAGGTAG CCGGTTACTA CCATTTGAAC TTTAAACTCT TCGTGGACGT CGACCGTTCC
GAAAAGCAGG CCGACGGTAC TTTTCTGACT TATTCCAATG ACGGTCAGGT TTTTCAGTCC
AAGAATGTGA TCCTGGCAAC GGGCTATTTC GACGTGCCGC GCATGCTGAA TGTACCGGGC
GAGAACCTGC CGCATGTTTC ACATTATTAT GATGAGCCAT TTAAATACTC CTACACCAAT
GTGGTGCTGG TAGGCGGTTC CAACTCGTCG GTAGAAGCGG CCTTGGAGCT CTATCGCCAT
GATGCCAAGG TGACGATCGT GCACAAAGAG GCCGATTTCC GTACCAAAGT GAAATACTGG
CTCGTGCCCG ACGTAAAAAA CCGGGTGAGA GAGGGCAAAA TCCACACGCG CTTCAACTCC
GTGACGCGGG CGATCGAACC CGGGCGCATG CTCATTGAAA ATGTGGAAAC GGGCGATCAG
GAATGGTTAC CGGCCGATTT CGTTTTTCTA TTGGTAGGTT ACCTGCCCGA CGAGCATTTG
CTTGCTCGCT GCGGCGTCAC GCTCGATCCG CTGACCAAAG TGCCGGAATA TGATTCAGAA
ACCTTCGAAA CCAATGTGCC GGGGCTGTAT TTGTGCGGGA CTGTACTGGC TGGTGTGTTT
ACCGAAAAGG TGTTTATTGA AAATGGCCGT GAGCACGCGG CTGCTATCGC TGATCATCTG
GCTGGCCGCG AAGTTCGTAA AGTGAATGAG CTCATTGACC GGATTTAG
 
Protein sequence
MHIYDAIIIG GGPCGLAMGV ELAKSGLDYL ILEKGNLTES IRRYPRRMKF FSTAENIEIG 
GIPFAISDVK ANRNEALQYY RKVAGYYHLN FKLFVDVDRS EKQADGTFLT YSNDGQVFQS
KNVILATGYF DVPRMLNVPG ENLPHVSHYY DEPFKYSYTN VVLVGGSNSS VEAALELYRH
DAKVTIVHKE ADFRTKVKYW LVPDVKNRVR EGKIHTRFNS VTRAIEPGRM LIENVETGDQ
EWLPADFVFL LVGYLPDEHL LARCGVTLDP LTKVPEYDSE TFETNVPGLY LCGTVLAGVF
TEKVFIENGR EHAAAIADHL AGREVRKVNE LIDRI