Gene Dfer_3364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3364 
Symbol 
ID8226943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4118503 
End bp4119648 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content56% 
IMG OID644931196 
ProductUDP-N-acetylglucosamine 2-epimerase 
Protein accessionYP_003087740 
Protein GI255037119 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0381] UDP-N-acetylglucosamine 2-epimerase 
TIGRFAM ID[TIGR03568] UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAAAA TCTGCGTTGT CATCACCGCC CGGGCCAGTT ATAGCCGCAT CAAGACGGTA 
TTGCAGGCGA TCCAGGCGCA TCCTCAGCTC GATTTGCAGA TTGTCGTCGC AGGAAGTGCG
CTCATAAGCA AGTTTGGAAA TATCCTGCCT CAGCTTGAAG CCGAAAACCT GCCTGTTTCT
GCCATTATCT CCAACCTGCT CGATACCGAA AGCAGCACGG CATCGGCAAA AACGACGGGG
CTCGCGATCA TTGAGCTGGC TACATTTTTT GCCAATCACC GGCCCGACGT GGTCGTGACG
GTCGCCGACC GCTTCGAAAC TATTGCCACA GCCATCGCGG CAATTAATAT GAACATCCCC
CTCGCGCACA TTCAGGGCGG CGAAGTGACG GGCAATATCG ACGACAGGAT CAGAAACAGC
ATTTCGCAAC TCGCGGACCT GCATTTTACG GCGACCCGGC AGGCCCGTAC CAGGCTCATG
GGCATGGGGC TGCCTGCTCA GAAGGTGTAT TGTACCGGCT GCCCGTCGAT AGACCTCGTT
CGGCAGCACA GGCATATTGA TTTCGATCCT TATAAGATGT ACGGCGGTAT CGGGGCGCGA
CCGGATTTGA ATAAGCCTTA TCTCGTGGTA CTGCAACATC CCGTCACCAC CGAAATCATC
CATTCGAAAT GGCAGATAGT ATGCACGCTA CGCGCATTGG CGACGCTCGG CATGCCTGTC
GTCTGGTTTT GGCCCAATGC CGACCCGGGT ACGGACGGAA CTGCACAGGG TATCAGGGCA
TTCCGCGAGG CAAATCCGGG ACTTCCGTTT CATTATTTCA AACACATGGA GTCGGACCAC
TTCATTCAGT TGCTGAAAAA CAGCGCTTGC CTGGTGGGAA ATTCGAGTGT CGGCATACGC
GAATGCAGTG CGCTGGGTGT ACCGGCGGTA AACATCGGAA GCAGGCAGCG GGGGCGCGAA
CGTGGCAGCA ATGTCGTCGA CTGCATCCCG GATGCGGATG CGATTGTGGC TGCCGTAAAG
CAACAATTGG CGCACGGTCA TTACCCTCCG GTTGCCATTT ACGGTGACGG CGACGCAGGC
GTCCGGATCG CCGACAGGCT TGCCACAGTC CCTTTTATTC TCAAAAAACA CCTCCTGCCA
TCATGA
 
Protein sequence
MRKICVVITA RASYSRIKTV LQAIQAHPQL DLQIVVAGSA LISKFGNILP QLEAENLPVS 
AIISNLLDTE SSTASAKTTG LAIIELATFF ANHRPDVVVT VADRFETIAT AIAAINMNIP
LAHIQGGEVT GNIDDRIRNS ISQLADLHFT ATRQARTRLM GMGLPAQKVY CTGCPSIDLV
RQHRHIDFDP YKMYGGIGAR PDLNKPYLVV LQHPVTTEII HSKWQIVCTL RALATLGMPV
VWFWPNADPG TDGTAQGIRA FREANPGLPF HYFKHMESDH FIQLLKNSAC LVGNSSVGIR
ECSALGVPAV NIGSRQRGRE RGSNVVDCIP DADAIVAAVK QQLAHGHYPP VAIYGDGDAG
VRIADRLATV PFILKKHLLP S