Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3336 |
Symbol | |
ID | 8226914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 4083653 |
End bp | 4084822 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644931167 |
Product | periplasmic binding protein |
Protein accession | YP_003087712 |
Protein GI | 255037091 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTAGAA TCATCAGTCT GCTCTTTCTT GCGGGCCTGC TTGTGCAGGG CTGTGCGCCG TCCGGAGAGG GCCAGCAAGA GCAGTCAGCT GCCGCCGATA CGTCCACACA GTTTGTAACG ACGGACATCC ATCACGCCCG CGGTTTCACG ATCCGCTATT TCCGCGATTT CAAGCTGGTG AGTATCATCA ATCCATTCGG TGCGAATGGC GACACGATTC AGTATATCCT GCAAAAAGCG GGTGCAGCTG TTCCCAAAAG CTACCCGAAA GCGCAGCGGA TCACGATTCC CGTAAAAAGC CTGGCGGCAA TGTCGTCCAT GCACATCGGC CTGCTTCACT TTCTCGACGC CGAAGATGTT TTGACGGGCC TCGGAAGCCT CCAATATGTG TTTTCACCTT ATGTAATCGA CAGGATTAAG GGCGGAAAGG TAGTCGGAGT GGGCCGCGAC CAGGGTTTGA ATGACGAAAA AGTGGTTGAA ATGCAGCCCG ATGTGGTCAT GACCGTCGGC AATCCGGGCG GAAAAATGGA CCATTACAAG GTGCTCCGGG AAGCCGGCAT TCCTGTGCTT ATCAACTCCG AATGGGTGGA GCAAACACCC CTGGCCCGTG CCGAATGGGT GAAGCTCATG GCCGCGTTGC TGGATAAAGA ACAGCTGGTG AACGAAAAAT TTGCGAAAGT TGAATCAGAA TATCAGCGAC TTACAGCCCT GGCGGCCAAC GCTGCCAAAA AGCCCACCGT TTTATCAGGC CTGAACACCA AAGATGCCTG GTTCGTACCC AGCGGCAACA GCTATATGGC GCGCTTTTTC GCCGACGCCG GTGCCGACTA TCCCTGGCAA ACTACCCAGT CGACAGGCAG TTTGCCGCTG CATTTCGAAG CCGTTTACCC AAAGGCATTA ACGGCCGACT ACTGGCTGAA CGTCGGCTTC GATCCCGCCG ACAGCCGGAA GAGCATTCTG GCGCAAGACT CGCGCTATGC CGATTTTAAT GCATTTAAAA ACAGGCAGAT GTACAGCTAC AACAACCGCG TGAATGCACT GGGCTCCAAT GACTTTTTTG AATCGGGCAG CGTTAACCCG CATATTGTGC TAGCCGACTT GATCCACATT TTCCATCCCG GGCTACAACC GGGTTACCAG CTTTACTACT ACAAACGACT TCCCGAATGA
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Protein sequence | MLRIISLLFL AGLLVQGCAP SGEGQQEQSA AADTSTQFVT TDIHHARGFT IRYFRDFKLV SIINPFGANG DTIQYILQKA GAAVPKSYPK AQRITIPVKS LAAMSSMHIG LLHFLDAEDV LTGLGSLQYV FSPYVIDRIK GGKVVGVGRD QGLNDEKVVE MQPDVVMTVG NPGGKMDHYK VLREAGIPVL INSEWVEQTP LARAEWVKLM AALLDKEQLV NEKFAKVESE YQRLTALAAN AAKKPTVLSG LNTKDAWFVP SGNSYMARFF ADAGADYPWQ TTQSTGSLPL HFEAVYPKAL TADYWLNVGF DPADSRKSIL AQDSRYADFN AFKNRQMYSY NNRVNALGSN DFFESGSVNP HIVLADLIHI FHPGLQPGYQ LYYYKRLPE
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