Gene Dfer_3322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3322 
Symbol 
ID8226900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4067718 
End bp4068839 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content54% 
IMG OID644931153 
Productdomain of unknown function DUF1745 
Protein accessionYP_003087698 
Protein GI255037077 
COG category[S] Function unknown 
COG ID[COG3287] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATTG AACAATTTGT CTATTCGGAT AGTCAATCCG AAATCGCATT CTCCTTTTCA 
CCGCAATTGC TGTTCATTTT CGGCGACCGC GAATTGCTTG AAACGACGGG AATTGCTCAC
CAACTGGCCT CGGAATTTCC GGGTGCGGTA TGTTCCGGAT GTTCCACAGC AGGCGAAATC
GCCAACGAAT CGGTGCGGGA GCACACGGTG ATCGTAACAG GCATCGCATT CGACTCCGTG
ATGGTGCGCA GCTCCAAAAT CCAGCTGACC GATGTGGCTT TCGATAGCAC GGAAGCGGGA
AAACTGCTCG TTTCCAAGCT TCCGCAGGAA GGTTTGAAAC ATGTTTTCGT CGTTTCGGAT
GGCCTGAAAG TGAACGGCAC CGACCTCGTC AAAGGCATGA CAGAAGGCCT TTCCGATGGC
GTTACCATTA CCGGCGGCCT CGCTGGCGAC GGTTCTCACT TCTCCCGTAC GATAATTATT
GAGCCCGATG GAAAAGTCGC GACGGAAAGT GTAGCGGCAA TCGGGTTTTA TGGTGAAAAA
TTGACGATCG GTTACGGCTC GCGCGGCGGA TGGGACAGTT TCGGGCTCGA CAGGGAAGTG
ACGCGTTCGC AGGACAACAT ACTTTACGAA ATCGACGGCC AGCCCGCACT TGACCTTTAC
AAATCGTTTT TGGGTGAAAA AGCCAAAGAA TTGCCGGCGT CGGGACTGCT GTTTCCACTG
AGCATGCGCG ATAATGAAGA CCGTGTTCCC GTGGTGCGCA CCATCCTGGG AATTAATGAG
GAAGAAAAGA GCCTCACATT CGCGGGCGAT ATTCCGCAGG GCTCATTTGT GCGATTAATG
AAGGCCAATA ACGACCGGCT TGTGAACGGG GCCGAAGAAG CGGCCCAGGA AGCCGGCCGC
GCACTGGGCA ATAGTCCGGA CTTCGCCATC CTGGTGAGCT GCGTCGGGCG CAAGCTCGTG
CTGAAACAAA TGGTGGAAGA GGAAGTGGAA TGCGTGTCCC AAGTGCTCGA CGGGCCTGTC
ATGACCGGCT TTTACTCATA CGGGGAGCTG GCGCCATTCA ACCGCGATTC GCTTTGCGAG
CTTCATAACC AGACTATGAC CATTACCACC TTCCGTGAAT GA
 
Protein sequence
MQIEQFVYSD SQSEIAFSFS PQLLFIFGDR ELLETTGIAH QLASEFPGAV CSGCSTAGEI 
ANESVREHTV IVTGIAFDSV MVRSSKIQLT DVAFDSTEAG KLLVSKLPQE GLKHVFVVSD
GLKVNGTDLV KGMTEGLSDG VTITGGLAGD GSHFSRTIII EPDGKVATES VAAIGFYGEK
LTIGYGSRGG WDSFGLDREV TRSQDNILYE IDGQPALDLY KSFLGEKAKE LPASGLLFPL
SMRDNEDRVP VVRTILGINE EEKSLTFAGD IPQGSFVRLM KANNDRLVNG AEEAAQEAGR
ALGNSPDFAI LVSCVGRKLV LKQMVEEEVE CVSQVLDGPV MTGFYSYGEL APFNRDSLCE
LHNQTMTITT FRE