Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3314 |
Symbol | |
ID | 8226892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 4058603 |
End bp | 4060087 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644931145 |
Product | transcriptional regulator, GntR family with aminotransferase domain |
Protein accession | YP_003087690 |
Protein GI | 255037069 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAGTC CGGTTGAAAT TCCCTTCCGA AATGTGATCC TGCTGGACCG TGCGTCCGGC ACCCCTGTTT ATCTGCAAAT CGCACACCAG ATGATCAACG CCATTCAGCG CGGCGTGCTG GTTACCGGCG TGCAACTGCC TGGAACACGG GCGCTTGCCG AAATGCTCGA CGTGCACCGT AAAACCGTGG TGGCCGCTTA CAACGAACTC GACGCGCAAG GGTGGATAGA AATGTTGCCG AACCGCGGGA CGTTCGTAAC CCGGAAAAGT CCGGTAGTCC GCGGCAGTGC GCTCGCGAGC GTGAGCGATT TGAAACAATA CCCCGAGCGC ACCGGTTTCG CATTCGAAGA GAGTATGCTG CTCGACCGGC CCGTTTCGCT TTCCCGGGTG GATTTGGAAT TTACCGACGG CCTTCCCGAC GTCCGCCTCG CGCCTATGGA TAAGCTAGCG AAAGCCTATT CGAGTGTGTT GAGAAGAAAT AACAACCGGA AATACCTTAG CTATTCGCAC GTGGAAGGGA ACGTCTGGTT CCGCGAGCGC CTCGCAACTT ACCTGAACAA CACGCGCGGG CTGCACATCG GCGCGGAGAA TATCATTACC ACAAGAGGCA TTCAGATGGG CATTTACCTG GCCTCGACGC TGCTGCTCAA AAAGGGCGAC AATGTGGTGG TGGGTGATTT GAGCTATTAT GTAGCCAATA TGATTTTTCA ACAAGCCGGT GCGAATATCC TTGCGGTACC GGTGGATGAT CAGGGGATTT CCGTAGAAGC GGTGCGCCAG CTTTGCGAGC GTACGGCCAT CAGAATGCTG TACATTACGC CGCATCACCA TTATCCCACC ACCGTCACGC TCAGCGCCGA GCGACGGGTG GAATTGCTGA ATTTGTCGGT GCAGTACGGG TTTATCATCC TCGAAGACGA CCATGACTAC GATTTTCACT ACAACAGCAG TCCCGTGCTG CCGCTGGCGA GTGCGGACGG CGCCGGGATG GTCGTGTACG TCGGTTCATT TTGCAAGGCA TTGGCGCCGG GTTTGCGGTC GGGATACGTG GTGGCGCCGC AGAACCTGAT CCGGGAATTG GGCAAAATGC GGCGGATTAT CGACCGGCAG GGCGACCTGA TGATGGAACA AGCCCTGGCC GAGCTGCTCG ATGAGGGCGA AATCCAGCGG CACATCAAGA AAGCGCAGAA AGTGTATCAC CTGCGGCGGG ATTTGTTTAC GGAATTACTG GAAAACGATT TCAGCCCTTA CCTCACCTTT AAGGCGCCGC CGGGCGGACT GGCGATCTGG ACGGAGTGGC GGCGGGACAT TAACCTCATG CGTGTGAGCA AGGAATGCCT GCGCGAAAAC CTGCATTTGC CCCAGACGCT GCTTTTCCAA ACGGGCCGGC TGAGCGCCAT CCGGCTGGGT TTCGGCAATC TGGACGAAAA AGAGCTGCGG GAAGCGGTGC GGATTCTGAA AGCGGCATTG GAAAAGACCG CCTGA
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Protein sequence | MSSPVEIPFR NVILLDRASG TPVYLQIAHQ MINAIQRGVL VTGVQLPGTR ALAEMLDVHR KTVVAAYNEL DAQGWIEMLP NRGTFVTRKS PVVRGSALAS VSDLKQYPER TGFAFEESML LDRPVSLSRV DLEFTDGLPD VRLAPMDKLA KAYSSVLRRN NNRKYLSYSH VEGNVWFRER LATYLNNTRG LHIGAENIIT TRGIQMGIYL ASTLLLKKGD NVVVGDLSYY VANMIFQQAG ANILAVPVDD QGISVEAVRQ LCERTAIRML YITPHHHYPT TVTLSAERRV ELLNLSVQYG FIILEDDHDY DFHYNSSPVL PLASADGAGM VVYVGSFCKA LAPGLRSGYV VAPQNLIREL GKMRRIIDRQ GDLMMEQALA ELLDEGEIQR HIKKAQKVYH LRRDLFTELL ENDFSPYLTF KAPPGGLAIW TEWRRDINLM RVSKECLREN LHLPQTLLFQ TGRLSAIRLG FGNLDEKELR EAVRILKAAL EKTA
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