Gene Dfer_3314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3314 
Symbol 
ID8226892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4058603 
End bp4060087 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content57% 
IMG OID644931145 
Producttranscriptional regulator, GntR family with aminotransferase domain 
Protein accessionYP_003087690 
Protein GI255037069 
COG category[E] Amino acid transport and metabolism
[K] Transcription 
COG ID[COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAGTC CGGTTGAAAT TCCCTTCCGA AATGTGATCC TGCTGGACCG TGCGTCCGGC 
ACCCCTGTTT ATCTGCAAAT CGCACACCAG ATGATCAACG CCATTCAGCG CGGCGTGCTG
GTTACCGGCG TGCAACTGCC TGGAACACGG GCGCTTGCCG AAATGCTCGA CGTGCACCGT
AAAACCGTGG TGGCCGCTTA CAACGAACTC GACGCGCAAG GGTGGATAGA AATGTTGCCG
AACCGCGGGA CGTTCGTAAC CCGGAAAAGT CCGGTAGTCC GCGGCAGTGC GCTCGCGAGC
GTGAGCGATT TGAAACAATA CCCCGAGCGC ACCGGTTTCG CATTCGAAGA GAGTATGCTG
CTCGACCGGC CCGTTTCGCT TTCCCGGGTG GATTTGGAAT TTACCGACGG CCTTCCCGAC
GTCCGCCTCG CGCCTATGGA TAAGCTAGCG AAAGCCTATT CGAGTGTGTT GAGAAGAAAT
AACAACCGGA AATACCTTAG CTATTCGCAC GTGGAAGGGA ACGTCTGGTT CCGCGAGCGC
CTCGCAACTT ACCTGAACAA CACGCGCGGG CTGCACATCG GCGCGGAGAA TATCATTACC
ACAAGAGGCA TTCAGATGGG CATTTACCTG GCCTCGACGC TGCTGCTCAA AAAGGGCGAC
AATGTGGTGG TGGGTGATTT GAGCTATTAT GTAGCCAATA TGATTTTTCA ACAAGCCGGT
GCGAATATCC TTGCGGTACC GGTGGATGAT CAGGGGATTT CCGTAGAAGC GGTGCGCCAG
CTTTGCGAGC GTACGGCCAT CAGAATGCTG TACATTACGC CGCATCACCA TTATCCCACC
ACCGTCACGC TCAGCGCCGA GCGACGGGTG GAATTGCTGA ATTTGTCGGT GCAGTACGGG
TTTATCATCC TCGAAGACGA CCATGACTAC GATTTTCACT ACAACAGCAG TCCCGTGCTG
CCGCTGGCGA GTGCGGACGG CGCCGGGATG GTCGTGTACG TCGGTTCATT TTGCAAGGCA
TTGGCGCCGG GTTTGCGGTC GGGATACGTG GTGGCGCCGC AGAACCTGAT CCGGGAATTG
GGCAAAATGC GGCGGATTAT CGACCGGCAG GGCGACCTGA TGATGGAACA AGCCCTGGCC
GAGCTGCTCG ATGAGGGCGA AATCCAGCGG CACATCAAGA AAGCGCAGAA AGTGTATCAC
CTGCGGCGGG ATTTGTTTAC GGAATTACTG GAAAACGATT TCAGCCCTTA CCTCACCTTT
AAGGCGCCGC CGGGCGGACT GGCGATCTGG ACGGAGTGGC GGCGGGACAT TAACCTCATG
CGTGTGAGCA AGGAATGCCT GCGCGAAAAC CTGCATTTGC CCCAGACGCT GCTTTTCCAA
ACGGGCCGGC TGAGCGCCAT CCGGCTGGGT TTCGGCAATC TGGACGAAAA AGAGCTGCGG
GAAGCGGTGC GGATTCTGAA AGCGGCATTG GAAAAGACCG CCTGA
 
Protein sequence
MSSPVEIPFR NVILLDRASG TPVYLQIAHQ MINAIQRGVL VTGVQLPGTR ALAEMLDVHR 
KTVVAAYNEL DAQGWIEMLP NRGTFVTRKS PVVRGSALAS VSDLKQYPER TGFAFEESML
LDRPVSLSRV DLEFTDGLPD VRLAPMDKLA KAYSSVLRRN NNRKYLSYSH VEGNVWFRER
LATYLNNTRG LHIGAENIIT TRGIQMGIYL ASTLLLKKGD NVVVGDLSYY VANMIFQQAG
ANILAVPVDD QGISVEAVRQ LCERTAIRML YITPHHHYPT TVTLSAERRV ELLNLSVQYG
FIILEDDHDY DFHYNSSPVL PLASADGAGM VVYVGSFCKA LAPGLRSGYV VAPQNLIREL
GKMRRIIDRQ GDLMMEQALA ELLDEGEIQR HIKKAQKVYH LRRDLFTELL ENDFSPYLTF
KAPPGGLAIW TEWRRDINLM RVSKECLREN LHLPQTLLFQ TGRLSAIRLG FGNLDEKELR
EAVRILKAAL EKTA