| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3261 |
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| Symbol | ispD |
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| ID | 8226836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 3994083 |
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| End bp | 3994763 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644931090 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_003087638 |
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| Protein GI | 255037017 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00927273 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAGAAT ACGTCATTAT CGTGGCCGGT GGGAGCGGAA GCCGCATGAA AAGCGATATC
CCGAAGCAAT TCCTGGCGGT AAATGGCACG CCGGTGCTCA TGCATACGAT CCGTGCATTC
GCCGCATATT CGCCGAATCT GCGCATCATT GTGGTATTGC CATCGGAGCA GTTCGGCTTT
TGGGAAGATT TATGTAAAAA ACACAGCTTC GCTATCCCGC ACCAACTTGT GGCTGGGGGC
GAAACGCGCT TTCATTCGGT CAAAAACGGC TTGAATTGCA TTGTGGAGGA AGAAGAATTC
CTCCTGGCCG TTCACGATGG TGTAAGGCCG GTTATTTCGC GTGAGATCAT CGCCGACAGC
TTCCAAACCG CCGCCCTGCA TGGCGCCGCT GTTGTGAGTG TGCCGCTCAA AGATTCCATC
CGCATTGTAG GGCAGAATGA GGGAAATAAG GCTATGGATC GCACATTGTT CCGGCTGATC
CAAACGCCGC AGACGTTCCG GTCGAGCTGG ATGCGCGCCG CATTCGCCGC CGACTATCAC
CAGTCATTCA CCGACTGCGC GAGCGTGCTC GAAGCCTGGG GCTACCATAT CAGGCTGATC
GACGGCGCTT ACGAGAATAT CAAGATCACG ACGCCGGAAG ATCTCCGCTG GGCGGAAATT
TATCTCAAAG CCACTTCCTG A
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| Protein sequence | MQEYVIIVAG GSGSRMKSDI PKQFLAVNGT PVLMHTIRAF AAYSPNLRII VVLPSEQFGF
WEDLCKKHSF AIPHQLVAGG ETRFHSVKNG LNCIVEEEEF LLAVHDGVRP VISREIIADS
FQTAALHGAA VVSVPLKDSI RIVGQNEGNK AMDRTLFRLI QTPQTFRSSW MRAAFAADYH
QSFTDCASVL EAWGYHIRLI DGAYENIKIT TPEDLRWAEI YLKATS
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