Gene Dfer_3251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3251 
Symbol 
ID8226826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3984812 
End bp3986020 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content50% 
IMG OID644931080 
Producthypothetical protein 
Protein accessionYP_003087628 
Protein GI255037007 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.18778 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAAT CTACCACCTC TGCCCTTCTC CGCAAATTAT CCTTTCTCCT TATATGGAGC 
CTTCTCATTC TCAACTCGTG TAATGACGAT ACCAAACCGG TACCGCCGAA AGAGGAGAAT
ATTTATCTGA AAGAAAGCTC GTCCATTGCC ACGCTCAATA AACAGCAGGT GCTCCAAAAG
GCCGGAACGC TGGCGGCCGT TGTGGCTCAG TATGTCAAGC ATGATATTAA AGTTTATAAA
ATCACTTATA AGACCAAAAA CACCGACGGC AGCGACATCA CTGCCTCGGG CGCATTGATT
TTGCCGGTTT CCACTGGGCC CGTGTCGATG ATCAGCGTGC AGCATGGCAC GATCTCCAAT
CCCGACGAAG CGCCATCCCT TTTCCGCGAC GGCTCCGAAG GTTCCTCTTT CGGATCGCTT
TTCGGGTCGA TGGGCTACAT TATCGCCTAT CCCGATTACA TTGGTTATGG CGAATCCAAA
GACCTTCCGC ACCCTTATGA GCACCGTGCG AGCCTGGCGT CGGCTTCGCT CGACATGCTG
CGGGCGGCCA AAGAGTTTCT GAGAGGGCAA ACAGACGTGA AATGGGATGA GAAGTTATAT
ATCGCCGGAT ATTCAGAAGG CGGCTTCGCG ACGATGTCGC TGCAACGGAA AATCGAGGAA
GAAGCCTCGT CTGAATTTAA TCTCCGCGCA TCGAGCTGCG GGGCGGGTGC TTACGACAAA
ACGGCATTCA TGAAGCACAT CATTAATGTT AAAACTGATG GCGTGGCGGG CTACAACTCG
CTTTACCTGT GGGTATTGCT GACATACGAC CGCATTTACA AGTTGAATAA ACCGGCCTCC
TATTATTTTA CCGAAAAATA TGCTCCGCAA ATCACGGCGT CGGGCAAAAA TGCTTCCATT
CCCGAAAGCT TCCACCTCGC GCTGAACGAT TCGTTTAAAA AAGCATTGAA CGACGGAACG
GACAAAGCGT TTATCGACGC CATTGCCGAT AACGATGTGT ACGATTTCAA GCCTAAAACG
CCTACACAGC TCTACCACGG CACCGATGAT CCGCTCGTAT TTTTCTTCAA TTCCGAAAAT
GCCTACAACG CCATGCAGAA GCGGGGCGCG ACCAATGTGG AGTTTATCAA GGTGAACAAA
GGCACGCACA GCAGCTCTAT TCTTCCGTTC CTGCTGGGTA CACAGGCGTT TTTTGCCAAT
ACTCTGTAA
 
Protein sequence
MQKSTTSALL RKLSFLLIWS LLILNSCNDD TKPVPPKEEN IYLKESSSIA TLNKQQVLQK 
AGTLAAVVAQ YVKHDIKVYK ITYKTKNTDG SDITASGALI LPVSTGPVSM ISVQHGTISN
PDEAPSLFRD GSEGSSFGSL FGSMGYIIAY PDYIGYGESK DLPHPYEHRA SLASASLDML
RAAKEFLRGQ TDVKWDEKLY IAGYSEGGFA TMSLQRKIEE EASSEFNLRA SSCGAGAYDK
TAFMKHIINV KTDGVAGYNS LYLWVLLTYD RIYKLNKPAS YYFTEKYAPQ ITASGKNASI
PESFHLALND SFKKALNDGT DKAFIDAIAD NDVYDFKPKT PTQLYHGTDD PLVFFFNSEN
AYNAMQKRGA TNVEFIKVNK GTHSSSILPF LLGTQAFFAN TL