Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3166 |
Symbol | |
ID | 8226741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 3874442 |
End bp | 3875944 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644930996 |
Product | ABC transporter related |
Protein accession | YP_003087544 |
Protein GI | 255036923 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGATC ACATTCTGAG GGTTAGGGAA ATTTCGAAGT CGTTTTCCGG CGTGAAAGCG CTGGATAACA TTCATTTTGA CCTCAAAAAA GGCGAAGTAC ACGCCCTGAT GGGTGAAAAT GGGGCTGGGA AATCCACTTT CATGAAAATC CTGATCGGGT TGGTGACGCC CGATTCCGGT GAGGTTTTGC TTGAAAACGA CAACCTTGTC GGCCACAATG TGAATGAGAC TTTGAAAAAA GGCATTTCCA TGATCCACCA GGAAATCCTG ATCGTTCCGG AACTGACCGT GGCGCAGAAT ATTTTTTTGG GACGAGAAAG GGAGGTTTCG GGGAAGCGCG GAATCCTGTC GGCCTGGCTG AATGACAGCG AAATCAACCA GCGTGCGGCT GCCTTGCTTG ACCGAATGGG TGTTAATATC GCTCCAAAGG CTAAGATGAA GCACCTCAGC GTGGCACAGA TGCAGATGGT AGAAATCGCG AAAGCCGTTT CCAACAATGC AAAAGTGATC ATCATGGACG AACCTACGTC GGCGATTTCG GACAAAGAAG TGGCGACGCT GTTCCAGATC ATCCGCGATT TGAAAGCACA GGGCGTGAGC ATTATTTACA TTTCCCACAA AATGGACGAG ATATTCCAAA TCTCGGACAC TATCACCGTG CTCCGCGATG GGAAGTATAT TGGTACCAAA GGCGCCGCCG AGCTGGACCA CCACGCATTG ATTGCTATGA TGGTGGGTCG GGAAATCGAT CAGATGTTCC CCGAAGCCAC GCAGCCGGTG GGGCCGGAAG TGCTTTCTGT GCGGAACCTG GGCAAGGCAG GTAAGTTTTC AAACATTAGT TTTCATGTAA AATCGGGTGA AATACTGGGG CTGGCAGGGC TAATGGGCGC TGGCAGGACC GAGATCGCAA GGGCCATATT TGGATTGGAT CAGTGGGATG AGGGAGAGGT TATGATTAAA ACGATACCAT TTCTTGCACG CACGCCGCGG GAAGCCATCG ACCGTGGGAT CGGGTATGTG AGCGAGGACA GGAAAGCGCT TGGATTTATT CCCAGAATGT CCGTAAAGGA TAACATCACG CTTTCGAGCA TGAACAATCA CCGCAAAGGC GGCTTTATCA ACACACACAG TGAGCAATCG GTTACCGAAA AAATGATCGC CGATTTGAAG ATCAAAACGG CCGGAACCGG TCAGCATGTT ACTTATTTAA GTGGCGGAAA CCAGCAAAAA GTCGTCATCG GCAAAGTGCT GCTGGCCTCC CCCGAAATCA TCATCCTCGA CGAGCCGACG CGCGGCGTAG ACGTTGGGGC GAAATTTGAA ATATATAAAC TAATCCGCAG CCTCGCCGAC CGCGGGATGG CCGTGATCAT GATCTCATCC GAACTCCCCG AAATCCTCGG CCTCAGCGAC CGCATTCTGG TATTATCCAA AGGCAAACAA ACAGCGCTGC TGTCCAAGAC CGAAGCGACG CAGGAGGTGA TTATGCGGTA TGCGGTGGCT TAG
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Protein sequence | MSDHILRVRE ISKSFSGVKA LDNIHFDLKK GEVHALMGEN GAGKSTFMKI LIGLVTPDSG EVLLENDNLV GHNVNETLKK GISMIHQEIL IVPELTVAQN IFLGREREVS GKRGILSAWL NDSEINQRAA ALLDRMGVNI APKAKMKHLS VAQMQMVEIA KAVSNNAKVI IMDEPTSAIS DKEVATLFQI IRDLKAQGVS IIYISHKMDE IFQISDTITV LRDGKYIGTK GAAELDHHAL IAMMVGREID QMFPEATQPV GPEVLSVRNL GKAGKFSNIS FHVKSGEILG LAGLMGAGRT EIARAIFGLD QWDEGEVMIK TIPFLARTPR EAIDRGIGYV SEDRKALGFI PRMSVKDNIT LSSMNNHRKG GFINTHSEQS VTEKMIADLK IKTAGTGQHV TYLSGGNQQK VVIGKVLLAS PEIIILDEPT RGVDVGAKFE IYKLIRSLAD RGMAVIMISS ELPEILGLSD RILVLSKGKQ TALLSKTEAT QEVIMRYAVA
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