Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3147 |
Symbol | |
ID | 8226722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 3844421 |
End bp | 3845644 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644930977 |
Product | transposase IS116/IS110/IS902 family protein |
Protein accession | YP_003087525 |
Protein GI | 255036904 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3547] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.166757 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGTAG TAGAATTCCC CCAGCTCATA GCCCGAGGTT GTGGCCTGGA TGTACACAAA GATACAGTAG TTGCTTCAAT CAAAGGGACG GGAATCCAGG AAGAAACCCG GACCTTCGCC ACCTTCACCA GAGACCTGGA AGATTTGTCG CATTGGCTTG AAGGCCATCA GATTACCCAC ATCGCTATGG AGAGTACGGG CGTTTACTGG CGGCCTGTGT ATTATGTTTT GGAAGGCCGC TTTGAGATCA TTTTGGTTAA TGCCCGTCAT ATCAAGAACG TTCCCGGCCA CAAAACTGAT AAAAAGGATT CCGAATGGAT CGCCAAGCTG CTGTTGAGCG GACTTCTTCG GCACAGCTTT GTCCCGGAAG GATGGGTGCG GGAGATAAGG ACATTGCTAC GCCACCGTAA GAAGCTTGTC AATGAGCGTA GCCGGGAGAA AAATCGGTTA CAGAATATTC TGGAAGATGC CAACATCAAG CTCGGCAGCG TGGTTAGCGA TGTGTTTTCC AAAACCGGAC AGGGGATCGT AGATCTGCTT ATGGAAGGAA TTACTGACCC CGTGGTTCTC TCAAACCAGG CCAAAGGTTC GCTGGTAAAT AAAAAGCAGG TTTTACAACA GGCGCTTTAC GGCCGGTTCT GTGAGCGTCA CCGCTTTATG TTAAAGTTGC TCACACAGAC AATGGGCGCC CTGGAAAAGC TCATCGAACA ACTTGACCAG CAGATTGAAC TTTGCCTGGC CGGTAAGCAG GCCGAGCTCG CACTACTGCA AACCATCCCA GGCGTATCCA GGCAATCAGC TATTGGTATC GTTTCCGAGA TCGGTCTGGA CATGTCCCAG TTTATCTCAG ACAAGCACCT GGCTTCTTGG GCAGGGGTAT GCCCAGGCAA CAACGAGAGT GCAGGAAAAG TAAGATCGGC AAGGACCACC CATGGCAACA CCTATTTGAA AACAACATTG ATCGAAGCAG CCTGGGCGGC AAGCCATACG ATGAATACCT ACCTGTCATT CAAGTACCAC AAGCTCACCC AAAGACGGGG AAAGAAGAAA GCGGCAATGG CGATTGCCCA CCACATACTC ACAGCATCAT ACCATATCCT CCGGGATAAA TTACCTTACA AGGAACCAGC CCTGAGACCA GAAATCCTGA TCGAAAGAAG GAAAGCTGAA ATCCAACGGT TAGAAAACCG CGTAAGGAAG TTGAAAATAT TAGCGTCCCA ATAG
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Protein sequence | MAVVEFPQLI ARGCGLDVHK DTVVASIKGT GIQEETRTFA TFTRDLEDLS HWLEGHQITH IAMESTGVYW RPVYYVLEGR FEIILVNARH IKNVPGHKTD KKDSEWIAKL LLSGLLRHSF VPEGWVREIR TLLRHRKKLV NERSREKNRL QNILEDANIK LGSVVSDVFS KTGQGIVDLL MEGITDPVVL SNQAKGSLVN KKQVLQQALY GRFCERHRFM LKLLTQTMGA LEKLIEQLDQ QIELCLAGKQ AELALLQTIP GVSRQSAIGI VSEIGLDMSQ FISDKHLASW AGVCPGNNES AGKVRSARTT HGNTYLKTTL IEAAWAASHT MNTYLSFKYH KLTQRRGKKK AAMAIAHHIL TASYHILRDK LPYKEPALRP EILIERRKAE IQRLENRVRK LKILASQ
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