Gene Dfer_3144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3144 
Symbol 
ID8226719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3835141 
End bp3835818 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content51% 
IMG OID644930974 
Productlipolytic protein G-D-S-L family 
Protein accessionYP_003087522 
Protein GI255036901 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2755] Lysophospholipase L1 and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATTAT TTTTCAAACT GCTGCAAATT GCCGTGATCA CGGTTCCATT ACTCGCTATG 
CGTGCCGACA AACCCCTGCG CGTCGTATTT TTCGGCGATT CCATCACCCA GGCGGGCGTA
AGTCCGACGG GATACATTAC CAAAGTAGGC GAAATGCTGA AATCCAAAGG CCAGGAAAGC
CAATATGAGC TGATCGGCGC CGGCATTGGC GGCAATAAGG TGTATGACCT CTACCTGCGG
CTCGAAGACG ACGTGCTGGC CAAAAAGCCG GATGTCGTAT TCATTTACGT GGGAATTAAT
GACGTATGGC ATAAAGCATC GTCGGGCACC GGCACTGATC CCGATAAATA TGTGAAGTTT
TACGAAGCGC TGATCAAGAA GCTGAAAGCG CAGAACATCC GTGTGATCGT TTGCACACCG
ACCGTAATCG GCGAGCGTAA CGACAATTCC AACCAGCAGG ATGGCGATTT GAATCAATAT
TCGAAGCTCA TCCGCGAAAT CGCGACCCGC AACAACCTGC AATTGCTCGA TCTGCGCAAG
CATTTCCAGG ACTACCTGGC GAGCAACAAC CCGGAAAACA AGGAAAAAGG CATCCTGACC
ACCGACCGCG TGCACTTAAC CGAAGCCGGG AACCAGTTCC TGGCCGAAAA AATGCTGGAA
GCGCTCGTGC AGAAATAG
 
Protein sequence
MRLFFKLLQI AVITVPLLAM RADKPLRVVF FGDSITQAGV SPTGYITKVG EMLKSKGQES 
QYELIGAGIG GNKVYDLYLR LEDDVLAKKP DVVFIYVGIN DVWHKASSGT GTDPDKYVKF
YEALIKKLKA QNIRVIVCTP TVIGERNDNS NQQDGDLNQY SKLIREIATR NNLQLLDLRK
HFQDYLASNN PENKEKGILT TDRVHLTEAG NQFLAEKMLE ALVQK