Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3106 |
Symbol | |
ID | 8226680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 3795605 |
End bp | 3797833 |
Gene Length | 2229 bp |
Protein Length | 742 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644930937 |
Product | copper-translocating P-type ATPase |
Protein accession | YP_003087486 |
Protein GI | 255036865 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01511] copper-(or silver)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.138352 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAGCGA CAACAGATAT AAAAAAAATA ACCCTGCCGG TAACAGGCAT GTCCTGCGCG GCGTGTGCGG TGAGCGTAGA GTCGATGCTG GGCCATACGA AGGGCGTCTC CGATGCGGCG GTGAACTATG CCAACCAGTC GGTGGCCGTT TCGTACGACC CCGACCTGAT CGACCTCCCC GAAATGGACC GCGTGCTGCA AAGCATCGGC TACGGGCTCA TCATCGAAGA AAACGAGGAA GACGCCATTG CCGAGCAGGA GAAAATCCAG CAGGAGCATT ACCTGCAACT GAAAAACAAG GCCATCTACA CCGGCATACT CACCGCGCCC ATCGTGGTGC TGGGCATGTT TTTCATGAAC TGGACTTATG CGAACTACAT CATGCTCGCC CTGACAATCC CCGTGCTCTT CATTTACGGC CGGGGATTTT TCGTGAATGC CTGGAACCAG GCGCGGCACC GGAAGGCTAA TATGGACACG CTCGTGGCGC TCAGCACCGG TGTAGCATTC CTTTTCAGCA CGTTCAACAC CTTTTTTCCG GCGTTCTGGC ACGCGCGCGG CCTGCACCCG CATGTGTATT TCGAAGCATC GGCGGTGATC GCCTTTTTCA TTTTGTTGGG TAAACTGATG GAAGAACGCG CCAAGTCGAA CACTTCGGAC GCATTGAAAA AACTCATTGG CCTGCAACCT AAAACGGTGA AAGTGTACCG CGACGGCGCT GAAACCGAAA TCCCGGTCCG CGAGGTGCGG CTGGGCGACG AGGTCATTAT CCGCTCCGGC GAGAAAATCC CAGTGGACGG CACCGTGGCG AGCGGAAGTT CGTTCGTGGA CGAGAGCCTG ATGACCGGAG AGCCCATTCC CGCCGAAAAG AAGCCCGGCG ACAGTGTTTT TGCAGGGACG ATTAACCAAA CCGGCAGCTT CACATTCACG GCCGAAAAAG TCGGAAAGCA AACCGTCCTG GCGCAGATCA TCAAAACCGT CCAGGCCGCG CAAGGCAGTA AGGCACCCGT GCAACGGCTC GCCGACCGCA TTGCCGGGAT ATTCGTTCCG GTGGTGATCG GCATTGCGAT GCTCACATTC GTGGCCTGGC TTGTGTGGGG TGGGGAAAAT GCCATTACAC ACGCCATGCT CACAGCGGTG TCGGTACTCG TGATCGCCTG CCCGTGCGCC CTGGGCCTCG CCACCCCTAC CGCGATGATG GTGGGCGTGG GCAAGGGAGC CGAAAACAAC ATCCTCATTC GCGACGCGGA AAGCCTTGAA AAGGCGTACA AAGTGGACGC CGTCATACTC GACAAAACCG GGACACTGAC CGAAGGCCGA CCCCAGGTGA CCGATTGGAA ATGGGCAGCT TCCGTCCAAA ACCAGCCGCA GCATTCGGCG GCCGTGAAAG CCCTCGAATC CCGCTCGGAG CACCCGCTTG CCACGGCGAT CGTCCAGCAT GTCGACACCG CAGGGCAACC GGAAGTTACC CGTTTCGAAT CGCTGACGGG CAGCGGCATC CGTGGCGTCG TTGCGGGCAA TGCCTATTCC ATTGGAACAT TTCAATTTCT TGAAAAAGAA GGCGTGCGGC TCGATGCTGC ACTGCAATCC GCCTATGACA CACTCACGGC ACAGGCCAAA ACCGTGATCG GAATCGCCAT TAACGGTCAG CATGCTGGCC TGGTAGCAAT CGCCGACCAG TTGAAACCGA CCTCGCGCGA GGCGGTAGCA CGGCTTCGCG GGCAGGGGAT CGAGGTACAT ATGCTCACCG GCGACAATGC GCAAACCGCC GCTGCTGTGG CATTCCAGGT CGGCATCGAC AGCTTCCGGG CGGAAGTGAA GCCGGACGAC AAAATGCAGT TCGTCCAAAA ACTGCAATCC GCCGGAAAAA CGGTAGCGAT GGTAGGCGAC GGCATCAACG ACTCGCAAGC CCTCGCGCAG GCGGACGTAA GTGTAGCAAT GGGCAAGGGT TCAGACATCG CAATGGACGT CGCCAAGATG ACCCTCATCA CCTCCGACCT GCTCGCATTG CCCAAAGCAT TGACCTTATC CCGAAAAACA GTAGTAACGA TCAGGCAAAA TCTGTTCTGG GCCTTCATCT ACAACCTCAT CGGTATCCCG ATCGCCGCCG GCGCCCTCTA CCCTCTCAAC GGCTTCCTCC TCGACCCAAT GATCGCCGGC GGAGCTATGG CACTCAGCTC GGTATCGGTG GTGATGAATA GTTTGCGGCT GAAAGGCAGC CGGCTGTAA
|
Protein sequence | MEATTDIKKI TLPVTGMSCA ACAVSVESML GHTKGVSDAA VNYANQSVAV SYDPDLIDLP EMDRVLQSIG YGLIIEENEE DAIAEQEKIQ QEHYLQLKNK AIYTGILTAP IVVLGMFFMN WTYANYIMLA LTIPVLFIYG RGFFVNAWNQ ARHRKANMDT LVALSTGVAF LFSTFNTFFP AFWHARGLHP HVYFEASAVI AFFILLGKLM EERAKSNTSD ALKKLIGLQP KTVKVYRDGA ETEIPVREVR LGDEVIIRSG EKIPVDGTVA SGSSFVDESL MTGEPIPAEK KPGDSVFAGT INQTGSFTFT AEKVGKQTVL AQIIKTVQAA QGSKAPVQRL ADRIAGIFVP VVIGIAMLTF VAWLVWGGEN AITHAMLTAV SVLVIACPCA LGLATPTAMM VGVGKGAENN ILIRDAESLE KAYKVDAVIL DKTGTLTEGR PQVTDWKWAA SVQNQPQHSA AVKALESRSE HPLATAIVQH VDTAGQPEVT RFESLTGSGI RGVVAGNAYS IGTFQFLEKE GVRLDAALQS AYDTLTAQAK TVIGIAINGQ HAGLVAIADQ LKPTSREAVA RLRGQGIEVH MLTGDNAQTA AAVAFQVGID SFRAEVKPDD KMQFVQKLQS AGKTVAMVGD GINDSQALAQ ADVSVAMGKG SDIAMDVAKM TLITSDLLAL PKALTLSRKT VVTIRQNLFW AFIYNLIGIP IAAGALYPLN GFLLDPMIAG GAMALSSVSV VMNSLRLKGS RL
|
| |