| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3087 |
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| Symbol | |
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| ID | 8226661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 3775314 |
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| End bp | 3776033 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644930918 |
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| Product | Deoxyribonuclease V |
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| Protein accession | YP_003087467 |
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| Protein GI | 255036846 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1515] Deoxyinosine 3'endonuclease (endonuclease V) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.674348 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTGATTA CACCCGAAGT AAATTACGAT CAGCTGACGA TCGGCGAGGC CACGCTCATC
CAGCAGCAAC TCCGCTCACA TTTGAAGCTG GAACCCTATC AAAAAGAGCC AAAAACGATC
GCCGGTGCCG ATATTTCACT CGCGCTGTAT AGTGAGACCG TTTATGCCGG ACTGGTGGTG
CTGAGCTATC CCGATCTTCA ACCAATCGCA TTTTCGCTCG TCAAAAGCAG CACGATATTC
CCCTATGTGC CCGGCTACCT GGCTTTTCGC GAAATTCCGG CAATCCTGAA AGCCTATGAA
CAGATCCCGG TAAAGCCCGA CCTGATCATG TTTGACGGAA ACGGCATCCT TCACGCACGC
CGGATGGGCA TCGCGTCGCA TTTCGGGGTG CTTACCGGCG CTGTTACGAT GGGTTGTGCC
AAAAAGAAAC TTGCAGGGCA GTATACCGAG CCCGGCACGA TGAAAGGAGA ATACACGCCC
GTTACAGATA AAGGCGAGGT GATCGGCTAT GCACTGAGGA CAAAGGACAA TGTCAAACCC
GTTTTCATTT CCCCCGGCCA TCAGATGACG CTCGAAGACA GCCTCACACT CGCACTCAAA
TGTACAGGCA AGCACCGGCT CCCCGAGCCC ACACGCCGCG CACACGAGTA CGTGAACCGC
TTCCGGACCG GCGAGCTGAC AGAAGGCTAC CACGAAATCA ACACCTGGAA CCTCTTCTGA
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| Protein sequence | MVITPEVNYD QLTIGEATLI QQQLRSHLKL EPYQKEPKTI AGADISLALY SETVYAGLVV
LSYPDLQPIA FSLVKSSTIF PYVPGYLAFR EIPAILKAYE QIPVKPDLIM FDGNGILHAR
RMGIASHFGV LTGAVTMGCA KKKLAGQYTE PGTMKGEYTP VTDKGEVIGY ALRTKDNVKP
VFISPGHQMT LEDSLTLALK CTGKHRLPEP TRRAHEYVNR FRTGELTEGY HEINTWNLF
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