| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3080 |
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| Symbol | |
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| ID | 8226654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 3768220 |
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| End bp | 3770130 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644930911 |
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| Product | type III restriction protein res subunit |
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| Protein accession | YP_003087460 |
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| Protein GI | 255036839 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | [TIGR00376] DNA helicase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTACT TCAAGCGACT ACTCGAATTA CTGAAAATAG AAAGGGAGGA AGACAAGCAA
TCGTACCAGC GATTGATCGA ACGCTCGTCT GTCTCCGAAC GCCGCGCCAA CGGACTGGCC
TGGTACCCCA TTGCCATCCG CGGCCAGGAA ATGAGCCGCG GCGACTACCT CACCGTAGAA
GTGGAACGCA CCACGCACCA GGAGGTGCCG CACCAGCTGC GCTTTGGCAT GCCCGCGGTT
TTGTTCAGCA ATCATGAACC TAAAAAAGAC CGTGTAGAAG GCGTAGTTTC GCACCAGGGC
GGCAACCGGC TGAAAATCAC GCTGCGCACG GATGAATTGC CCGAATGGTC GCGCGATGGC
AAGCTGGGCA TTGATTTGCT CTTCGACGAT AATAGTTATG ATGAAATGCA ATCCGCATTG
AAAACGGCGG ATTCGCTGGG TTCGTCGGAC AAAGAAGGGC ATTTGATCAA AGTGCTTACC
GGCGAGAAGG CACCTTCATT TGACAAGGAC ATTTATCCCA TTACGCTTCC CAAACTGAAC
CCATCGCAGC AGCGGGCGGT GCAGAATATC CTTTCCGCAC AGGAGCTGGC GATCGTGCAC
GGGCCTCCGG GCACGGGCAA GACCACCACG CTGGTGCAGG CGATCAAGGC ATTGGTCAAA
AAGGATAACC GGCCCATCCT GGTGGTGGCG CCGAGCAACA CGGCGGTGGA TTTGCTGAGT
GAAAAACTGA GTGAAGAAGG CCTGAACGTG CTCCGCGTGG GTAACCCGGT CCGCGTTTCA
GAACGACTTA CGGCGCTGAC TTTGGACAGC AAAATGTCCT CACACGCGAG CGTGAAGGAC
ATTAAGACAT TGAAAAAGCA GGCCAACGAA TACAAAAACA TGGCGCACAA ATACAAGCGC
CATTTCGGGA AAGCCGAGCG GGACCAGCGG AAGGCATTGT TCGACGAGGC GCACCGCATT
ATGAAGGACG TCGCGAATAT GGAGCAATAC ATTATCGACG ACCTGCTCAC CAAAACGCAG
GTGGTAACGG CCACGCTCGT GGGCTCCAAC CACTTCACCG TCCGCAATAT GAAATACCGC
ACCGTGGTGA TCGACGAGGC CGGGCAGGCA TTGGAGCCAG CCTGCTGGAT ACCGATCCTC
AAAGCCGAAA AAGTGGTCTT TGCCGGTGAC CATTTGCAGC TGCCGCCGAC CATCAAGTCG
GAAGAGGCGG CGAAGGGCGG GCTCAGCACC ACATTATTGG AAAAATGCGT GGCATTGCAC
CCCGAATCGG TGGTGCTGCT GGAAGAACAA TACCGGATGA ATGAGGCGAT TATGGGTTAT
TCTTCCAAAG TCTTTTATCA TGACAAACTC AAAGCGCATG AATCGGTGGC GGGCCGTGTG
CTGTTCCCGG GCGAGGCGCC CCTGGCATTT GTCGATACGG CGGGCTGCGG GTTTGATGAT
AAACTGGAAG GGACCAGCTC TACCAACCCC GAAGAAGCCG CTTTCCTCTT CAAGCATTTG
ACCCAGCTCG CTGCGGAATT TGCAAAGGTT AACCCAAAAC CGGAAAGCTT TCCGAGCATT
GCTATTATCT CGCCTTACAA AGAGCAGATC AACATCCTCA AAAACCTGCT CGCGCACGCG
CCCCACTTGC AACTTTACCT GGACAAGATA GCCGTCAACA CCATCGACAG CTTCCAGGGG
CAGGAGCGGG ATGTGGTGTA TATCAGCATG ACCCGAAACA ATATCGAAGG GCAAATCGGC
TTCCTGGCCG ACATTCGCCG CATGAACGTG GCCATGACCC GCGCACGCAA GAAGCTCGTC
GTGATCGGCG ACAGCGCCAC ACTTTCGGTG TTGCCGTTTT ATGAAAATTT CATTGCCTAT
GCCCAGGGGC TGAATGCCTA CCAGAGTGCC TGGGAGTTTT CGGATTTATA A
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| Protein sequence | MDYFKRLLEL LKIEREEDKQ SYQRLIERSS VSERRANGLA WYPIAIRGQE MSRGDYLTVE
VERTTHQEVP HQLRFGMPAV LFSNHEPKKD RVEGVVSHQG GNRLKITLRT DELPEWSRDG
KLGIDLLFDD NSYDEMQSAL KTADSLGSSD KEGHLIKVLT GEKAPSFDKD IYPITLPKLN
PSQQRAVQNI LSAQELAIVH GPPGTGKTTT LVQAIKALVK KDNRPILVVA PSNTAVDLLS
EKLSEEGLNV LRVGNPVRVS ERLTALTLDS KMSSHASVKD IKTLKKQANE YKNMAHKYKR
HFGKAERDQR KALFDEAHRI MKDVANMEQY IIDDLLTKTQ VVTATLVGSN HFTVRNMKYR
TVVIDEAGQA LEPACWIPIL KAEKVVFAGD HLQLPPTIKS EEAAKGGLST TLLEKCVALH
PESVVLLEEQ YRMNEAIMGY SSKVFYHDKL KAHESVAGRV LFPGEAPLAF VDTAGCGFDD
KLEGTSSTNP EEAAFLFKHL TQLAAEFAKV NPKPESFPSI AIISPYKEQI NILKNLLAHA
PHLQLYLDKI AVNTIDSFQG QERDVVYISM TRNNIEGQIG FLADIRRMNV AMTRARKKLV
VIGDSATLSV LPFYENFIAY AQGLNAYQSA WEFSDL
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