Gene Dfer_3078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3078 
Symbol 
ID8226652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3764212 
End bp3765342 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content46% 
IMG OID644930909 
Producthypothetical protein 
Protein accessionYP_003087458 
Protein GI255036837 
COG category[R] General function prediction only 
COG ID[COG1373] Predicted ATPase (AAA+ superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.318961 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTTA TGGTCATTAG AAGTCTTCAA ACCGTACTCC AAAAGAAGCT GTATGACGGT 
AAAGCGATCA TATTGACAGG GGCTAGGCAA GTAGGTAAAA CTACATTATT GCAAGGCTTG
TTCGGAAATT CGGATGACAC ACTTTGGCTC AATGGTGATG AAGCGGATGT ACGGGCACTA
TTCGATAATG CCACGTCCAC GCGGCTGAAA AACCTTTTCG CAGGAAAGAA AAACGTCGTC
ATTGACGAAG CGCAGCGTAT TGCCGACATC GGCGTGAAAT TAAAGTTGAT AACCGATAAT
ATTCCCGGCA TTCAGCTGGT GGCCACCGGA AGCTCGGCTT TCGAGCTTGC CAATAAAATA
AATGAACCGC TCACGGGACG GAAATGGGAG TATCAGATGT TTCCCCTTTC ATTTGGTGAA
ATGGTGAATC ACCACGGACT GATCGAAGAG CGGAGGTTGT TACCTCAGCG GCTGCTTTAT
GGCTATTATC CTGATATCGT CAACAACCCT GGCGAGGAGA AAGAGATTTT AAAACAACTT
TCCGACAGCT ATCTGTATAA GGATATACTC ACCTGGGAAA ACATTCAGAA GCCGGAGAAA
TTGTTGCGCT TATTGCAGGC ATTGGCATTT CAGGTAGGCT CGCAAGTATC TTATAATGAA
CTAGGTACCA TGTGCGGCCT TGATAATAAG ACGGTCGAGA AGTACATCAA CCTCCTCGAA
CAGGTTTTCA TCATTTTCCG GCTCAGTTCA TTTAGCCGGA ACTTACGCAA CGAACTGAAA
AACAGCCGGA AAATCTATTT CTACGACAAC GGCATCCGCA ATGCATTGAT TGCCAATTTC
AACCAGCCCG AGTTACGAAC GGACATTGGT GCGTTATGGG AGAACTTCAT GATCTCGGAG
CGGATGAAGT TTGTGAACTA TAATGGCATT TGGGCAAATC AATACTACTG GCGCACGAAA
GAGCAAAACG AGATTGATTA CCTCGAAGAT ATTGACGGAA AACTGCACGC TTACGAGTTC
AAATGGAGCT CCAAAGCAAG GGCCGTTTTA TCTAAAACAT TCAGCAACGC ATATCCGGGC
AGCGAGTTTA CCATTGTCCA TCCTGGCAAT TTCGACGACT TCCTCCTCTA A
 
Protein sequence
MLLMVIRSLQ TVLQKKLYDG KAIILTGARQ VGKTTLLQGL FGNSDDTLWL NGDEADVRAL 
FDNATSTRLK NLFAGKKNVV IDEAQRIADI GVKLKLITDN IPGIQLVATG SSAFELANKI
NEPLTGRKWE YQMFPLSFGE MVNHHGLIEE RRLLPQRLLY GYYPDIVNNP GEEKEILKQL
SDSYLYKDIL TWENIQKPEK LLRLLQALAF QVGSQVSYNE LGTMCGLDNK TVEKYINLLE
QVFIIFRLSS FSRNLRNELK NSRKIYFYDN GIRNALIANF NQPELRTDIG ALWENFMISE
RMKFVNYNGI WANQYYWRTK EQNEIDYLED IDGKLHAYEF KWSSKARAVL SKTFSNAYPG
SEFTIVHPGN FDDFLL