Gene Dfer_3005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3005 
Symbol 
ID8226578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3672344 
End bp3672778 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content52% 
IMG OID644930835 
Productprotein of unknown function DUF107 
Protein accessionYP_003087385 
Protein GI255036764 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1585] Membrane protein implicated in regulation of membrane protease activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTGA CCTTACCACA GATTTGGCTC ATTGTAGGAC TGGTAATGCT CCTCGCAGAA 
CTGGTCAGCG TCCTGCTCGT GTTCGTGTTT TTCGCGATAG GCGCCTTGCT CACTTCTCTG
CTTACTTCAA TCGGCCTGCT CCCCACTACC GAAAGCCAGA TACTGGCCTT TTCGGCCATT
TCGCTCGTGT CGCTGCTGGT GCTCCGGAAA CACGCCCGCA AGCTCCTCGA ACGCCGCTCC
ACGGCAGAAT ACAGCGAATT CACCGGTGAA ACCGCCATGG TAATCCGCGA TATTCCCGGC
AACGGCGAAG GCCGCATTTA CTATCGCGGT GCCGAATGGA AAGCCGTTTC TGAAAATCAT
GAAAACATTT CGGCCGGCAG TAAAGTGGTA ATCAAGAAAA CAGAAGGCAT TATTCTGATC
GTGGAAGAAT CCTGA
 
Protein sequence
MDLTLPQIWL IVGLVMLLAE LVSVLLVFVF FAIGALLTSL LTSIGLLPTT ESQILAFSAI 
SLVSLLVLRK HARKLLERRS TAEYSEFTGE TAMVIRDIPG NGEGRIYYRG AEWKAVSENH
ENISAGSKVV IKKTEGIILI VEES