Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3001 |
Symbol | |
ID | 8226574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 3665738 |
End bp | 3667054 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644930831 |
Product | nucleotide sugar dehydrogenase |
Protein accession | YP_003087381 |
Protein GI | 255036760 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAATTG CAGTAGTAGG AACAGGATAC GTCGGTTTGG TGACAGGTAC CTGCTTTGCC GAGACCGGCA ACCAGGTAAC ATGCGTAGAC ATCGACGTCA GGAAGGTGGA ACGCCTTCAA AAAGGAGAAA TACCCATTTA CGAGCCCGGC CTCGACGTGC TTTTCGACCG CAATGTGGCT GAGGGGCGCT TGTTGTTTAC TACCAACCTG GCCGAAGGTA TCAAAGATGC GCAGGTGATT TTCCTGGCAT TGCCCACGCC TCCGGGCGAG GACGGCTCTG CCGATCTCAA ATATATCCTG AAAGTAGCCG ACGACCTAGG TCCGATCCTC GATCAGTACG CGGTGATCAT CGACAAGAGC ACCGTGCCCG TAGGAACAGC CGAGAAAGTG CGTGCTGCGG TTGCTAAGAA TGCCAAAGTG GACTTCGATG TGGTGTCCAA CCCAGAGTTC CTTCGCGAAG GTGTTGCGGT GGAAGATTTC ATGAAGCCCG ACCGCGTGGT GGTGGGTACA ACCTCGGAAA AAGCCAAAAA GGTGATGGAG AAACTCTACG CTCCACTGGT GCGCCAGGGT AACCCGGTGA TCTTTATGGA TGAGCGCTCG GCCGAGATGA CCAAATATGC GGCCAACTCG TTCCTGGCGA TGAAGATCAC GTTCATGAAC GAAATCGCGA ACCTTTGCGA GAAAGTAGGT GCCAATGTGG ACGATATTCG TCGTGGTATC GGAACCGACA GCCGTATCGG CAAGCGCTTC CTTTTTGCGG GGATCGGCTA CGGTGGCAGC TGTTTTCCTA AGGACGTTCA GGCTTTGGCT AAAACTTCAA AGGATTACGA CTACGACTTC CGCATTCTGA AATCGGTGAT GGATGTGAAC TACGATCAGA AGAAGAAATT GCTTCCGATG GTAGAAAACT ACTTCACCGA CGGCCTGAAA GGCAAAACGA TTGCAGTATG GGGATTGGCA TTCAAGCCTT ATACCGACGA TATCCGTGAA GCGCCAGCAT TGGAAAACAT CGAAGCATTG CTTGAAGCAG GCGCCAAAGT GGTAGCTTAC GATCCGGAAG CGATGACGAA TGTGAAAGGC ATTCTGGGAG ATAAAATCAC ATTTACCCAC ACGCCTTACG CAGCGCTCGA CGACGCGGAT GCATTGATGA TCTTTACCGA ATGGCCTCAG TTCCGCACGC CGGAATTTGA AAAAATGGGT AAGCTGCTGA AAAATAAAGT CGTTTTCGAC GGCAGAAACC TGTACGAACT CGATCAGATG CGCGAAATGG GTTACACCTA TTACAGCATC GGTCGCGAGA AGGTGGTGCC GGCCTGA
|
Protein sequence | MKIAVVGTGY VGLVTGTCFA ETGNQVTCVD IDVRKVERLQ KGEIPIYEPG LDVLFDRNVA EGRLLFTTNL AEGIKDAQVI FLALPTPPGE DGSADLKYIL KVADDLGPIL DQYAVIIDKS TVPVGTAEKV RAAVAKNAKV DFDVVSNPEF LREGVAVEDF MKPDRVVVGT TSEKAKKVME KLYAPLVRQG NPVIFMDERS AEMTKYAANS FLAMKITFMN EIANLCEKVG ANVDDIRRGI GTDSRIGKRF LFAGIGYGGS CFPKDVQALA KTSKDYDYDF RILKSVMDVN YDQKKKLLPM VENYFTDGLK GKTIAVWGLA FKPYTDDIRE APALENIEAL LEAGAKVVAY DPEAMTNVKG ILGDKITFTH TPYAALDDAD ALMIFTEWPQ FRTPEFEKMG KLLKNKVVFD GRNLYELDQM REMGYTYYSI GREKVVPA
|
| |