| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2996 |
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| Symbol | |
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| ID | 8226569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 3661651 |
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| End bp | 3662640 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644930826 |
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| Product | TIM-barrel protein, nifR3 family |
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| Protein accession | YP_003087376 |
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| Protein GI | 255036755 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTAAGA TTGGAAATAT AGAACTGAGT GAATTTCCGT TGCTGCTCGC CCCGATGGAG
GACGTGAGCG ACCCGCCGTT CCGCGCGGTG TGCAAGGAAA ACGGGGCCGA TTTGATGTAC
ACCGAATTTG TGTCGTCCGA AGGGCTCATT CGTGATGCTG CCAAAAGCGT TCAGAAACTG
GACATTTTTG AATATGAAAG ACCGGTCGGC ATCCAGCTGT TCGGTAGCGA TGTGGAAACG
ATGGGCTCTT GCGCGGAGAT CGCCTCACGT GTGAATCCCG ACCTGATCGA CATCAATTAC
GGATGCCCGG TGAAGAATGT CGCGTGCCGC GGTGCCGGCG CTGCATTGTT GCAGGACGTA
CCGAAGATGG TCAAAATGAC CGAGTCGGTA ATTAAATCGA CGCATTTGCC GGTGACGGTC
AAAACACGTC TCGGATGGGA TGATAACACC AAAAACATCC AGGAAGTGGC GGAGCGGTTG
CAGGACATCG GGATCAAGGC ATTGTCCATT CACGGTCGCA CACGCGTACA GATGTACAAA
GGCGCCGCCG ACTGGTCGCT CATTGCCAAA GTGAAGGAAA ACCCGCGCAT TACCATCCCT
ATTTTTGGGA ATGGCGACGT GGATACGCCC GAGAAGGCAT TGGAATACAA AAATACCTAC
GGCGTGGACG GCATCATGAT CGGCCGCGCG ACGATCGGCA ACCCGTGGAT CTTCAATGAG
ATCAAGCATT ACCTCAAAAC CGGCGAAAAA CTGCCGCCGC CCACCATGGA GCAGCGCGTG
GACGTCTGCC GCAGGCACCT CGAATTTTCG ATCCGCTGGA AAGGGCCGGT GGCCGGTGTT
TTTGAAATGA GAAGGCACTA TACCAATTAT TTCAAAGGGC TGGAACACTT TAAGCCATAC
AGAATGCGCC TGGTGGAAGC ACCTACATTC GACGAGCTCG ACAGCATCCT CAAAGAAATT
TCGAACGATT ACAGTGAAAT GGTATGCTGA
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| Protein sequence | MVKIGNIELS EFPLLLAPME DVSDPPFRAV CKENGADLMY TEFVSSEGLI RDAAKSVQKL
DIFEYERPVG IQLFGSDVET MGSCAEIASR VNPDLIDINY GCPVKNVACR GAGAALLQDV
PKMVKMTESV IKSTHLPVTV KTRLGWDDNT KNIQEVAERL QDIGIKALSI HGRTRVQMYK
GAADWSLIAK VKENPRITIP IFGNGDVDTP EKALEYKNTY GVDGIMIGRA TIGNPWIFNE
IKHYLKTGEK LPPPTMEQRV DVCRRHLEFS IRWKGPVAGV FEMRRHYTNY FKGLEHFKPY
RMRLVEAPTF DELDSILKEI SNDYSEMVC
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