| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2983 |
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| Symbol | |
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| ID | 8226556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 3648857 |
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| End bp | 3651451 |
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| Gene Length | 2595 bp |
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| Protein Length | 864 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644930813 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_003087363 |
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| Protein GI | 255036742 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.773158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCAAAGG CACACAAAGA AACTCCGCTT AATAAACAAT ACAATCAGAT CAAAGCCAAG
TACCCCGGAG CACTGCTGCT TTTCCGGGTC GGCGATTTTT ATGAGACTTT CGGAGAGGAT
GCCGTAAGGG CTTCCAAGAT TCTCGGCATC GTACTCACGC GTCGCAACAA TGGCGGTGCG
CATGAGGAGC TGGCCGGTTT TCCGCACCAT TCACTGGATA ACTATCTTCC CAAGCTCGTC
CGTGCCGGCG AGCGCGTGGC CATTTGCGAC CAGCTCGAAG ATCCCGCCGC AGCCAAAGGC
ATCGTGAAAC GGGGCGTAAC CGAATTGGTA ACGCCCGGCG TGTCGTTCAA CGACAATGTG
CTGGACATCC GCAAAAATAA TTACCTGGCC GCCGTGCACG TCGGCTCCGA TGGGCTGTAC
GGGATCGCGT TCCTCGATAT TTCGACGGGC GAGTTTATGG CCTCTCAGGG CAATGCGGCT
TACATTGATA AAATGTTGCA GGGCTTTGGT CCCGCGGAGG TGCTGTATTG CAAAAAGCAT
AAGCAGGAAT TTAACGAACT TTTCGGCGGT AAATACCATA CTTTTCACCT CGAAGACTGG
TGCTTTGGCT ACGATTACGG CTACGAGCAG CTCACGGGGC ATTTTCAGAC CACAACCCTG
AAAGGTTACG GCGTGGAATC ACTGCCGCTG GGTATTATCG CGGCGGGCGT TGTCCTGCAT
TACCTGCGCG AAACCGAGCA TAAGGAAGTG GCGCACATTA GCCGCATTAC CCGGCTCGAA
GAAGAGAAAT ACGTGTGGCT CGACCGTTTC ACCGTCCGCA ACCTCGAACT CGTATATGCC
CAGCAGGAAG GCGGTGTGCC GCTGATCGAC ATCCTCGATC ACACGGTTAC ACCTATGGGT
GCGAGGCAGT TGCGGAAATG GATGGTTCTG CCTTTGAAAG ACAAGGCGCC GATCGAAGAG
CGCCTGAGTG CCGTGGAGCA TTTCCTCGCA AGTGAGGAAT TACACGAGTC GCTGGTGGGC
TATTTCAAAC AGATCGGTGA TCTGGAACGG CTTATTTCCA AAGTGGCGGT GCGGCGTATC
AATCCGCGTG AACTGGTTCA GCTTAAAAAG TCCCTGAAAC AGGTTGCGCC GGTGAAACAA
CTGCTAGCGG GCGGTATCCT GGACAAGTTT GCTTCCCAGC TCGATGCCTG CGGGGCATTG
GTTGAAAAGA TAGATAAGGA GCTGCGCGAC GACGCGCCGG TGCTGTCGAA CCAGGGCCGG
ATGGTCCAGA GCGGGGTGGA CAGCGAGCTC GACGAACTGC ACGCCATTTC TTACGAAGGG
AAGGATTACC TGATCAAACT CCAAAACCGG GAGATAGAGC GGACGGGTAT CAGCTCGCTC
AAAATCGCCT ATAACAAGGT TTTTGGCTAT TACCTGGAAG TTACGCACGC ACACCAAAGC
AAGGTGCCTG CGGACTGGAT CAGGAAACAG ACGCTCGTAA ATGCCGAACG ATACATCACG
CCCGAGCTCA AAGAATACGA AGAGAAGATC ATGAATGCCG AAGACCGCAT TTCCGCGATC
GAGTTCAGGA TTTTCAGTGA ATTGGTGCAA AAAGCAGCCG AGTTTGTAGG TGCCATCCAG
CAGAATGCTT TGGTAATTTC GGCCCTCGAT GTGCTAAGCT CGTTTGCATT GGCAGCGCGT
AAAAACAAGT ATGCAAAGCC GGTGATCAGC GAAGGCAATG AGCTGGATAT CAAAGAAGGC
CGGCATCCGG TGATCGAGCA GCAGCTGCCC GTGGGCGAAA GCTACGTGCC GAACGACGTT
TACCTGGACG ATTCGAGCCA GCAGATCATC ATCATCACCG GTCCGAACAT GGCCGGTAAG
TCCGCATTGC TGCGCCAAAC GGCGCTGATC GTGCTCATGG CGCAAATGGG TTCATTCGTC
CCCGCCAGAT CGGCGACCGT CGGCATTGTC GACAAAGTGT TTACAAGGGT GGGAGCGAGC
GACAACCTGA GCCGTGGCGA GAGTACCTTT ATGGTCGAAA TGACCGAAAC CGCCAGCATT
CTCAATAACC TGAGCAGTAA AAGCTTGGTA TTAATGGATG AAATCGGCCG GGGAACGAGC
ACCTACGATG GCGTTTCCAT TGCCTGGGCC ATTACCGAAT ACCTTCACAA CCAATCCGAT
TGCCGGCCCA AAACGCTTTT CGCGACGCAT TACCACGAGC TGAACCAGCT GGCGGAGGAC
TTCCCGCGCA TCAAAAACTT TAATGTAGCC GTAAAGGAGG TGGACAACAA GGTGGTGTTC
CTGCGCAAGC TGAAACCTGG CGGCAGCGCG CACAGTTTCG GTATCCACGT GGCGCAAATC
GCCGGTATGC CGCAGCCTAT CGTGTTACGT GCGAGCGAAA TCATGCAGCA TCTGGAAAAG
GACCACGTGG CGCACGAGCA CAAGAAGCGT GTGAAGGACA TTCCTAAAAA CAATTTCCAG
CTCAGCATTT TCGAGCCGGC CGATCCGCGT TTGGACGAGC TGAAAGAAAA GCTGCTGCTG
GTGGACGTAA ACACACTGTC GCCCATTGAA GCACTTCTGA AACTAAACGA GTTTCAGAAA
CTGATCAAGA AATAA
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| Protein sequence | MAKAHKETPL NKQYNQIKAK YPGALLLFRV GDFYETFGED AVRASKILGI VLTRRNNGGA
HEELAGFPHH SLDNYLPKLV RAGERVAICD QLEDPAAAKG IVKRGVTELV TPGVSFNDNV
LDIRKNNYLA AVHVGSDGLY GIAFLDISTG EFMASQGNAA YIDKMLQGFG PAEVLYCKKH
KQEFNELFGG KYHTFHLEDW CFGYDYGYEQ LTGHFQTTTL KGYGVESLPL GIIAAGVVLH
YLRETEHKEV AHISRITRLE EEKYVWLDRF TVRNLELVYA QQEGGVPLID ILDHTVTPMG
ARQLRKWMVL PLKDKAPIEE RLSAVEHFLA SEELHESLVG YFKQIGDLER LISKVAVRRI
NPRELVQLKK SLKQVAPVKQ LLAGGILDKF ASQLDACGAL VEKIDKELRD DAPVLSNQGR
MVQSGVDSEL DELHAISYEG KDYLIKLQNR EIERTGISSL KIAYNKVFGY YLEVTHAHQS
KVPADWIRKQ TLVNAERYIT PELKEYEEKI MNAEDRISAI EFRIFSELVQ KAAEFVGAIQ
QNALVISALD VLSSFALAAR KNKYAKPVIS EGNELDIKEG RHPVIEQQLP VGESYVPNDV
YLDDSSQQII IITGPNMAGK SALLRQTALI VLMAQMGSFV PARSATVGIV DKVFTRVGAS
DNLSRGESTF MVEMTETASI LNNLSSKSLV LMDEIGRGTS TYDGVSIAWA ITEYLHNQSD
CRPKTLFATH YHELNQLAED FPRIKNFNVA VKEVDNKVVF LRKLKPGGSA HSFGIHVAQI
AGMPQPIVLR ASEIMQHLEK DHVAHEHKKR VKDIPKNNFQ LSIFEPADPR LDELKEKLLL
VDVNTLSPIE ALLKLNEFQK LIKK
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