Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_2939 |
Symbol | |
ID | 8226512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 3603287 |
End bp | 3603898 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644930769 |
Product | fumarylacetoacetate (FAA) hydrolase |
Protein accession | YP_003087319 |
Protein GI | 255036698 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.494423 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATTA TTTGTGTAGG CCGGAATTAC GCAGAGCATA TCGCCGAACT GAACAACCAG ACACCCGATT CCCCGGTTAT ATTTCTGAAA CCTGAAACCG CACAACTCCG CCCGGGCGAG GACTTTTACT ACCCGGAATT TTCAAAAGAC GTTCACTACG AAGTGGAGCT CGTAGTGAAG ATCAACCGGG CAGGGAAGAA CATCGAAGAG AAATTCGCAC ATAAATATTA TAGCGAGATC GGCATTGGCG TGGATTTCAC GGCCCGCGAT CTCCAATCGG AGCTGAAATC GAAAGGCCTG CCGTGGGAGC TCGCGAAGGC ATTCAACGGC TCGGCGCCGG TTTCGGATTT TGTGCCGGTG TCGGATTTTG GTGATATTCA GGACATTAAT TTCAGCCTGG ATGTGAATGG CGAAACGCGC CAAAGTGGAA ATTCATCGAT GATGATCTAC CGCATTAACT ACCTGATTTC CTTCGTTTCC AAATACTTCA TGCTCAAAAC GGGTGACCTC ATCTTCACAG GCACGCCAAA AGGCGTGGGT CCGGTGCAGA TCGGCGATAA GCTGACGGCC TCGATTGAAG GCAAGAAGAT GCTCGAACTG TTCGTTAAGT AA
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Protein sequence | MKIICVGRNY AEHIAELNNQ TPDSPVIFLK PETAQLRPGE DFYYPEFSKD VHYEVELVVK INRAGKNIEE KFAHKYYSEI GIGVDFTARD LQSELKSKGL PWELAKAFNG SAPVSDFVPV SDFGDIQDIN FSLDVNGETR QSGNSSMMIY RINYLISFVS KYFMLKTGDL IFTGTPKGVG PVQIGDKLTA SIEGKKMLEL FVK
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