Gene Dfer_2927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2927 
Symbol 
ID8226500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3592860 
End bp3593984 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content53% 
IMG OID644930757 
Productimidazole glycerol-phosphate dehydratase/histidinol phosphatase 
Protein accessionYP_003087307 
Protein GI255036686 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0131] Imidazoleglycerol-phosphate dehydratase 
TIGRFAM ID[TIGR01261] histidinol-phosphatase
[TIGR01656] histidinol-phosphate phosphatase family domain
[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG TACTATTTAT CGATCGCGAC GGTACGATCA TCGTCGAGCC ACCTACCGAC 
TTTCAGGTCG ATTCCCTGGA AAAGCTCGAA TTCCTGCCCA AAGCCATTTC CGCATTGCGC
AAAATTGCGG AAGAAACCGA TTACGAGCTT GTAATGGTTA CCAACCAGGA CGGCCTCGGA
ACGAGTTCTT TTCCCGAAGA CACTTTCTGG CCTGCCCAGA ACAAGATGGT GAAAACGCTC
GAAGGCGAAG ACGTCCGGTT CGCAGATGTG CATATCGACC GCAGTTTCCC GGAAGACAAC
CTGCCTACCC GCAAGCCGGG CATCGGCATG CTGACCTCGT ATTTCTCCAA TGAATACGAC
CTGGCCAACA GCTACGTCAT CGGCGACCGC CTTACCGACG TGCAACTGGC CGTCAATCTA
GGCGCAAAGG CGATCCTTTT CCGCTCCGAA CTGCCGGAAG AAGGCCTCTC CGGCGAGCAT
AATGAAGCCA CTGCATTGAT TTCCAGCGAC TGGGACGCTA TATACGAGCA TTTGAAACTC
CCTTCTCGCA AGGCATCAGT CGAAAGAAAC ACAAAGGAAA CGCAGATCAA AGTAGAACTG
AACCTCGACG GCAGCGGCCG CTCCGACATT CATACCGGCC TCGGCTTCTT CGACCATATG
CTCGACCAGC TCGCGCGCCA TTCAGGAGCG GATCTATCGA TCCACGTCGT GGGAGATTTG
CATATCGACG AGCACCACAC GATAGAGGAT ACCGCCCTCG CATTAGGCGA AGCCTACCGC
CAGGCAATCG GTGATAAGCG CGGCATCAGC CGGTACGGCT TTCTGTTGCC GATGGACGAG
GCGCTGGCAC AGGTAGCGAT CGACTTTTCG GGCCGTCCGT GGATCGTCTG GGATGCCGAA
TTTAAGAGAG AGAAGATCGG AGAAATGCCT ACCGAGATGT TTTTTCACTT TTTCAAGTCA
TTCTCAGACA CTTCGCTTTC CAACCTGAAC ATCAAGGTGG AAGGTGACAA TGAGCACCAC
AAGATCGAAT CGATTTTCAA GGCATTTGCG AAGGCCATTA AAATGGCGGT GAAACGCGAC
CTTAAAGCGC TGGATTTCAT GCCATCGACG AAAGGAGTGC TTTAA
 
Protein sequence
MKKVLFIDRD GTIIVEPPTD FQVDSLEKLE FLPKAISALR KIAEETDYEL VMVTNQDGLG 
TSSFPEDTFW PAQNKMVKTL EGEDVRFADV HIDRSFPEDN LPTRKPGIGM LTSYFSNEYD
LANSYVIGDR LTDVQLAVNL GAKAILFRSE LPEEGLSGEH NEATALISSD WDAIYEHLKL
PSRKASVERN TKETQIKVEL NLDGSGRSDI HTGLGFFDHM LDQLARHSGA DLSIHVVGDL
HIDEHHTIED TALALGEAYR QAIGDKRGIS RYGFLLPMDE ALAQVAIDFS GRPWIVWDAE
FKREKIGEMP TEMFFHFFKS FSDTSLSNLN IKVEGDNEHH KIESIFKAFA KAIKMAVKRD
LKALDFMPST KGVL