Gene Dfer_2889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2889 
Symbol 
ID8226462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3556387 
End bp3556737 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content48% 
IMG OID644930719 
Productdihydroneopterin aldolase 
Protein accessionYP_003087269 
Protein GI255036648 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1539] Dihydroneopterin aldolase 
TIGRFAM ID[TIGR00525] dihydroneopterin aldolase
[TIGR00526] FolB domain 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.141193 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGGAACGA TCAGTCTCGA AGGACTCGAA TTTTTTGCAT ACCACGGCTA TTACCCCGAA 
GAACAACGCA TCGGCAACAA ATACGCCCTG GATATTACTA TTACCACGGA CTTTTTCCAA
GCCGCTCAGC ACGACAAGCT GAGTGAGACC GTCAATTACG AAACCATTTA CCAGCTCACG
GCCAAGGTCA TGAAAGAGCC GGCCAAGTTA TTGGAACACA TTGGTTTTAA TGTAATTGAA
AAAATACGGG AGCATTACCC GGCGGTGGAG AAGGTGACTG TAAAAGTCTC AAAGTTCAAC
CCGCCGATAG GAGGGGTCTG CACCCGGGCG GTGATCACGA TGGAAGGATA A
 
Protein sequence
MGTISLEGLE FFAYHGYYPE EQRIGNKYAL DITITTDFFQ AAQHDKLSET VNYETIYQLT 
AKVMKEPAKL LEHIGFNVIE KIREHYPAVE KVTVKVSKFN PPIGGVCTRA VITMEG