Gene Dfer_2876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2876 
Symbol 
ID8226449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3544099 
End bp3545391 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content53% 
IMG OID644930706 
Productpeptidase M24 
Protein accessionYP_003087256 
Protein GI255036635 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0006] Xaa-Pro aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0874223 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00406602 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCGATATT CCCCCATCGA CCAAAAACTA TTTATTGAAA ACAGACGCCG TTTAACGACA 
TTACTCAAAC CTAGATCCCT GGCCATACTC AATGCAAACG ACATTATGCC AACCAACGCA
GACGGCACAA TGGGTTTCAA ACAAAACAGC GATTTGTTCT ACCTCACGGG TGTCGACCAG
GAGGAAACGA TCCTGCTCAT CTTCCCCGAC CACCCCGATC CGAAGTTCCG CGAAGTCCTT
TTCCTCCGCG AAACGAACGA AACCATCGCC GTTTGGGAAG GCGAAAAACT CACCAAGGAA
CAGGCCCGCG CCGCCACTGG CATTCAAAGC ATTTACTGGA CGCACCAATA CGAAACCGTT
TTCGGCAACA TCGTTTTTGA GGCTGAAAAC GTGTATTTGA ACACCAACGA ACACACCCGC
AACGATTCTT ATGTACAGTC ACGCGATGCG CGGTTTATTG AGTGTTTCAA AAAACAATAT
CCGCTGCACC ACCTCGTGCG CCTGGCGCCG CTCATGCACC AGCTCCGCGC CGTGAAGCAG
CCGGAGGAAA TTGCATTGCT GCAAAAGGCT TGCGACATTA CGAAACAGGG TTTCGAAAGA
GTATTGAAAT TCGTGAAACC CGGCGTGCAC GAATTCGAGA TAGAAGCCGA ACTGCTCCAC
GAGTTTGTCC GCAACCGTTC GAAAGGTTTC TCCTACCAGC CGATCATTGC TTCGGGCGCA
AATGCGTGCG TGCTGCATTA CATCCAAAAC GACCAGGTTT GCAAGGACGG TGACATCCTG
CTCCTCGATG TAGCCGCTGA ATACGCCAAC TATGGCGCCG ACCTTACCCG CAGCATCCCG
GTGAACGGCC GCTTCACCAA GCGCCAGCGC GATGTGTACG ACGCCGTTCT GCGTGTTTTC
AAAGCGGCCA AAGGCCTGCT TGTGCCAGGC AACATCTGGG ACGAATACCA CCAGGAAATC
GGCCGCATCA TGGAAAGCGA GCTCATCGGC CTCGGCCTGA TCACCCGGGA TGACATTGCC
AAACAAGACC CCGATACGCC GGCCTACAAG AAATATTTCC CGCACGGCAC GTCGCATTTC
CTGGGCCTCG ACATCCACGA CGTCGGCAAT AAATACCGCC GCTTCGAACC CGGCATGGTC
TTCACCTGCG AGCCGGGCAT CTACATTCGC GAGGAAGGAT TGGGCATCCG GTTGGAGAAT
GATATTCTAA TTACGGAGAA TGGGAATGTG GATTTAATGG CAGATATCCC ATTGGAGGCC
GAGGCGATTG AGGAGTGGAT GAATGGTAAG TGA
 
Protein sequence
MRYSPIDQKL FIENRRRLTT LLKPRSLAIL NANDIMPTNA DGTMGFKQNS DLFYLTGVDQ 
EETILLIFPD HPDPKFREVL FLRETNETIA VWEGEKLTKE QARAATGIQS IYWTHQYETV
FGNIVFEAEN VYLNTNEHTR NDSYVQSRDA RFIECFKKQY PLHHLVRLAP LMHQLRAVKQ
PEEIALLQKA CDITKQGFER VLKFVKPGVH EFEIEAELLH EFVRNRSKGF SYQPIIASGA
NACVLHYIQN DQVCKDGDIL LLDVAAEYAN YGADLTRSIP VNGRFTKRQR DVYDAVLRVF
KAAKGLLVPG NIWDEYHQEI GRIMESELIG LGLITRDDIA KQDPDTPAYK KYFPHGTSHF
LGLDIHDVGN KYRRFEPGMV FTCEPGIYIR EEGLGIRLEN DILITENGNV DLMADIPLEA
EAIEEWMNGK