Gene Dfer_2833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2833 
Symbol 
ID8226406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3497934 
End bp3499202 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content51% 
IMG OID644930663 
Productprotein of unknown function DUF214 
Protein accessionYP_003087213 
Protein GI255036592 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCAACAA CTTATTTAAA GAACAGATTC CTCTTGCAGT TCCCCTCATT TATCGCCAAA 
CGCATTCGTC ATAACGAAGC TGGATCTTTC TCCGCTACGG TTTCACGGAT CGGCGTGGCC
AGTATCGCGA TCAGCGTGGC AGTGGGGATC ATCGCATTTG CCGTACTGCT GGGTTTCAAG
CAGACCATAC AGCAAAAAAT ATTCCTTTTC GGCGCGCACA TCAATGTAAA TGCATTTTCG
CAGGGAAATA CCTACGAGGA AGGTCCACTG CCATTGAAGA ATCCCGTGTC CGACATCCTG
CCCGCTCTCC CGGAGGTGAA GCGCTGGCAG GCAGTTGCCC ACAAATCGGG CATTTTGAAA
ACGCCGGAGG AGATTAAAGG CGTGATCCTG AAAGGTGTAG GCAAGGATTA CGACTGGGAT
ACTTTCAAAC AAAACCTCGT GGAAGGCAAG CTCATCACGC GATCCGATTC GTCTTCCATT
AAATACGGCT ATTCATCGCA GATTCTGATC AGTCGCAAAA TCGCTTCGCA AATGCGCCTG
AAAACCGGCG ACGATGTGAT CATGTATTCG CTCCAAAATC CTCCCAGACC AAGAAAACTG
ACCATCGCAG GGATTTACGA AACCGAAATG GAGGAGTTTG ACAACAACCT CATCCTTGGC
GACATCGGGC TCGTTCAGCG GCTAAATGGC TGGGGCGCCG ATTCGGTGGG CACTTACGAA
ATTTATCTCA AAGACTTCCG AGACCTCGAC GCGGTCACCG GTAAGCTCCG CCGCGAACTG
CCGCCGGGGT TGTATTTGCA AAAAGTGACG AGCCTTTTCC CCCAGATTTT CGACTGGCTC
ATTCTTCTCG ACCGCAATAC GGCGGTATTC CTCACGCTCA TTCTTTTCGT GGCTTGCTTC
AATATGATCT CAATTCTGCT CGTGATGATC ATGGAAAGAA CGCCGCTGAT CGGCTTGCTA
AAAACGCTGG GAAGTCCTAA CCGGCAGATT CGGATGGTTT TCTTCCAGGT CGGTCTGGAC
CTGGTACGTC GCGGGCTGGT GATCGGCAAC GTGGGCGGAT TGCTGCTTTG CTGGCTGCAA
TATCAGTTCA AGCTCATCCC GCTCGACCCG GTTAACTATT ACATGGATAC CGTTCCGATC
GTGTTCGACT GGGGAATTTT CGCGATGGTG AACCTCGTCA CAGTGGTCAT AACGGCACTA
ATCCTGCTTA TCCCAACGCT CATCATCACA CGGATACAGC CGATCAAGGC ATTGCTATTT
AAAAAGTAG
 
Protein sequence
MSTTYLKNRF LLQFPSFIAK RIRHNEAGSF SATVSRIGVA SIAISVAVGI IAFAVLLGFK 
QTIQQKIFLF GAHINVNAFS QGNTYEEGPL PLKNPVSDIL PALPEVKRWQ AVAHKSGILK
TPEEIKGVIL KGVGKDYDWD TFKQNLVEGK LITRSDSSSI KYGYSSQILI SRKIASQMRL
KTGDDVIMYS LQNPPRPRKL TIAGIYETEM EEFDNNLILG DIGLVQRLNG WGADSVGTYE
IYLKDFRDLD AVTGKLRREL PPGLYLQKVT SLFPQIFDWL ILLDRNTAVF LTLILFVACF
NMISILLVMI MERTPLIGLL KTLGSPNRQI RMVFFQVGLD LVRRGLVIGN VGGLLLCWLQ
YQFKLIPLDP VNYYMDTVPI VFDWGIFAMV NLVTVVITAL ILLIPTLIIT RIQPIKALLF
KK