| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2804 |
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| Symbol | |
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| ID | 8226377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 3465704 |
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| End bp | 3469528 |
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| Gene Length | 3825 bp |
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| Protein Length | 1274 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644930634 |
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| Product | methionine synthase |
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| Protein accession | YP_003087184 |
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| Protein GI | 255036563 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.294328 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAGCAA CTCAAAAAGC AGATATCCGC GAAATTCTCA AAAACCGTAT TCTGGTACTG
GATGGCGCTA TGGGTACGAT GATCCAGCGG TATAAATTGC AGGATCACGA CTACCGGGGA
GAACGGTTCG CGGACTGGCC GCATGATGTG AAAGGGAACA ATGATTTGCT TTCACTCACA
CGTCCCGACA TTATCAAAGA AATTCACGCC GCCTATTTCG CGGCAGGGGC AGATATTGCC
GAAACCAATA CATTTTCGGG CACCACCATC GCCATGGCCG ATTACGGCAT GGAGGAAATC
GTGTACGAAC TCAACTATGA ATCCGCGCGG CTGGCACGCG AAGTCGCCGA CGAATTTACC
GAACGCGAGC CGCACAAGCC GCGTTTCGTA GCAGGTTCGA TCGGCCCAAC CAACCGCACC
GCGTCGCTTT CGCCGGACGT GAACAACCCC GGCTTCCGCG CCATCAGCTT CGACCAGCTC
GTGGAAGCCT ATTACGAACA GGTAAAAGGC CTCACCGACG GCGGCTGCGA CCTGCTTTTG
GTGGAAACCA TATTTGATAC ACTCAATGCC AAAGCCGCGC TGTTCGCGAT CGACCAGTTC
TTTGCCGATG CGAAAGCCGG GAAAGTGGAA CACCTGGAAT CCTGGCGGAT CGAGCCGGGG
CAGGCGTTGC CGATCATGAT CTCGGGCACG ATTACCGATG CTTCGGGGCG GACGCTTTCA
GGACAAACCA CCGAGGCATT CCTGACCTCG GTATCGCATT TGCCATTATT ATCAGTAGGC
CTCAACTGTG CATTGGGAGC AGATTTGATG CGTCCTTACG TGCAGATTAT GGCCAAAGAA
TCGCCTTTTT ACACCTCGGC GCACCCGAAT GCGGGCTTGC CGAACGAAAT GGGCGAATAC
GACGAGACGC CGGAGCAAAT GGGGGAGGTG ATCGACGGGT TTTTGAGGGA TAACCTGGTC
AATATCATCG GCGGCTGCTG CGGTACCACG CCTGATCACA TTCGTGTGAT TGCGGAAATC
GCCGGAAAAC ACAGCCCGCG ACCGCTGCCG GCTTCCGAAA CGGTGATGAA GCTTTCGGGT
CTCGAACCGG TCAAAATCAA TGCATTGACC AACTTCGTGA ACATCGGTGA GCGCTGTAAC
GTGACGGGTT CGAAGAAATT CGCCCGCCTG ATCCGCGAGA GCAAATACGA CGAAGCGCTG
AGCATTGCGC GCGAGCAGGT AGAAAGCGGC GCGCAGGTGA TAGACGTTAA CCTCGACGAA
GGGATGATCG ACGGTGTGGA GGCGATGAAG ACATTTGTGA ACCTGATCGC ATCCGAGCCC
GACATTTCCA AAGTACCGCT GATGATCGAC TCCTCGAAAT GGGAGGTGAT CGAATCAGGG
CTAAAATGCG TGCAGGGGAA ATCTATCGTG AACTCGATTT CTCTCAAAGA AGGAGAAGAG
AAATTCAAGG AATCGGCCCG GACCGTGCTT CGCTACGGCG CCGCTACGGT GGTGATGGCT
TTTGACGAAA AAGGCCAGGC CGACAACTAC GAGCGCCGCA TTGAAATCTG CGAACGTGCC
TACCGCATTT TGGTGGACGA AGTAGGTTTC CCGGCCGAGG ACATCATTTT TGACCCCAAC
ATCCTGACCG TCGCGACGGG AATGGAAGAA CATAACAATT ACGCGGTTGA CTTTATCAAC
AGTGTGAGAT GGATCAAGGA AAACCTGCCG CATGCGAAAG TATCGGGTGG TGTTTCCAAC
GTGTCGTTCA GTTTCCGCGG GAACGAGCCG GTGCGTGAGG CAATCCACAC GGCGTTCCTG
TACCACGCGA TCAAGGCGGG AATGGATATG GGCATCGTGA ACGCAGGCCA GATCGGCATT
TATGATGAAA TTCCGAAAGA CGTGCTGGAA CTGGTGGAGG ATGTGCTGCT TAACCGCCGC
GCGGATGCCA CGGAACGTTT GGTAACTTAT GCGGAAACCG TAAAAGACAA GGGCAAATCG
CAAAGTGGTC CGGATCTTTC TTGGAGACAA CTTCCTGTGA AAGAGCGAAT TTCTCACGCA
TTGGTGAAAG GCATTGCTGA TTATGTGGAT GAAGACACCG AGGAATGCCG CTTGCTGTTC
GATCGTCCGC TGGAAGTGAT CGAAGGCCCA TTGATGGATG GCATGAGCAT CGTCGGCGAC
TTGTTCGGCG AAGGGAAAAT GTTCCTGCCG CAGGTTGTGA AATCGGCGCG TGTGATGAAA
AAGGCTGTGG CTTATTTGCA GCCATTTATC GAGGCGGAGA AACAGGACGG CGGTTCATCG
GCCGGTAAGA TTCTGCTTGC TACCGTTAAA GGCGATGTTC ACGACATTGG TAAAAACATT
GTGGGCGTGG TGCTTGGCTG TAACAATTAC GAGATCATCG ACCTGGGCGT AATGGTGCCG
ACCGACAAGA TCCTGGCCGC TGCGCAGGAA CATAATGTGG ATATCATCGG TCTGTCGGGG
CTGATCACGC CATCGCTGGA CGAAATGGTG GGTGTGGCCA AAGAAATGGA GCGCCGCAGC
ATGAAAATGC CGTTGCTCAT CGGCGGTGCT ACTACATCCC GCATTCATAC GGCGGTGAAA
ATCGACCCGA ATTACTCGGG ACCGGTGATC CACGTGCTCG ATGCCTCCCG TTCGGTGCCG
GTGGCCGGTA AGCTCATCCA GAGCGAGCAA AGCCAGGCCG AAGTGCTGGC GGATATCAAA
GCCGAATACG CCAAGCTGCG CGACGACCAC TCAAAACGCG GCGGTGAAAA AGCGCATGTG
GCCATCGGCA AAGCGAGGGA CAACAAGGCC AAAATCGATT GGACAAACTT CCAGGCAGTG
AAACCGCAGT TCCTGGGTAC GCGGGTGTAC GACGATTACG ATCTGGCCGA AATTTCGAAA
TACATTGACT GGACGCCATT CTTCCAGACC TGGCAGCTGC ACGGAAAATA TCCTAAGATT
TTCGATGATG CCGTGGTTGG GAAGGAAGCA CAGCGGTTAT TCGAAGATGC AGCCGTGCTG
CTCGGTGAGA TTATTCGCGA TAAAACACTG AAAGCCCGCG CCGTAGTGGG TTTCTGGCCC
GCCAACTCGA TCGGTGACGA CATTGTGCTG CACCATTTCA ACGAAGAAAC GAGGGAGGTG
CTTTGCGAAC GTCACGGGTC GCATCAGCAT ATTGAATATA AAATCAGTCA GCAAGGCGTC
GAAAACCTGA ATGCAGGCGA GCTTGTGGCC GATACCGCTG CGGTATTGCA CCATCTGCGC
CAGCAAAGCC AGAAAGCTGC CAACCTGCCC AATTACTGCT TGTCCGACTT CGTAGCACCG
CTCGAATCGG GCCATACCGA TTATGTGGGT GGTTTTGCGG TGACGGCAGG TGTAGGAATA
GAGGCGCTGC TCGAAAAATA CGAGAAGGAC CACGACGATT ACAACAGCAT TATGATCAAA
GCCCTTGCCG ACCGTTTGGT GGAAGCATTG GCGGAATTAA TGCACGAAAA GGTGCGGAAG
GAGCTTTGGG GTTATGCCAA AGAGGAGAGC TTCTCCAACG AAGAGCTCAT CAAAGAAGAA
TACAAAGGCA TTCGTCCGGC ACCCGGCTAC CCGGCCTGCC CCGACCACAC CGAAAAGCGC
CATTTGTTCG ACCTACTGAA TGCAGAAGAG CTGGGCATTA CATTGACGGA AAGCTTTGCG
ATGTATCCGG CTAGCAGCGT TTCAGGCTGG TATTTTTCAC ATCCGGACAG CCGATATTTC
CCGGTTGGAA AAATTTACAA GGACCAGGTG GAGGACTACG CACGCCGGAA AAACATGCCG
GTGGAGGAGA TTGAGAAGTG GCTCTCGCCA GTGCTCGCTT ATTAA
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| Protein sequence | MVATQKADIR EILKNRILVL DGAMGTMIQR YKLQDHDYRG ERFADWPHDV KGNNDLLSLT
RPDIIKEIHA AYFAAGADIA ETNTFSGTTI AMADYGMEEI VYELNYESAR LAREVADEFT
EREPHKPRFV AGSIGPTNRT ASLSPDVNNP GFRAISFDQL VEAYYEQVKG LTDGGCDLLL
VETIFDTLNA KAALFAIDQF FADAKAGKVE HLESWRIEPG QALPIMISGT ITDASGRTLS
GQTTEAFLTS VSHLPLLSVG LNCALGADLM RPYVQIMAKE SPFYTSAHPN AGLPNEMGEY
DETPEQMGEV IDGFLRDNLV NIIGGCCGTT PDHIRVIAEI AGKHSPRPLP ASETVMKLSG
LEPVKINALT NFVNIGERCN VTGSKKFARL IRESKYDEAL SIAREQVESG AQVIDVNLDE
GMIDGVEAMK TFVNLIASEP DISKVPLMID SSKWEVIESG LKCVQGKSIV NSISLKEGEE
KFKESARTVL RYGAATVVMA FDEKGQADNY ERRIEICERA YRILVDEVGF PAEDIIFDPN
ILTVATGMEE HNNYAVDFIN SVRWIKENLP HAKVSGGVSN VSFSFRGNEP VREAIHTAFL
YHAIKAGMDM GIVNAGQIGI YDEIPKDVLE LVEDVLLNRR ADATERLVTY AETVKDKGKS
QSGPDLSWRQ LPVKERISHA LVKGIADYVD EDTEECRLLF DRPLEVIEGP LMDGMSIVGD
LFGEGKMFLP QVVKSARVMK KAVAYLQPFI EAEKQDGGSS AGKILLATVK GDVHDIGKNI
VGVVLGCNNY EIIDLGVMVP TDKILAAAQE HNVDIIGLSG LITPSLDEMV GVAKEMERRS
MKMPLLIGGA TTSRIHTAVK IDPNYSGPVI HVLDASRSVP VAGKLIQSEQ SQAEVLADIK
AEYAKLRDDH SKRGGEKAHV AIGKARDNKA KIDWTNFQAV KPQFLGTRVY DDYDLAEISK
YIDWTPFFQT WQLHGKYPKI FDDAVVGKEA QRLFEDAAVL LGEIIRDKTL KARAVVGFWP
ANSIGDDIVL HHFNEETREV LCERHGSHQH IEYKISQQGV ENLNAGELVA DTAAVLHHLR
QQSQKAANLP NYCLSDFVAP LESGHTDYVG GFAVTAGVGI EALLEKYEKD HDDYNSIMIK
ALADRLVEAL AELMHEKVRK ELWGYAKEES FSNEELIKEE YKGIRPAPGY PACPDHTEKR
HLFDLLNAEE LGITLTESFA MYPASSVSGW YFSHPDSRYF PVGKIYKDQV EDYARRKNMP
VEEIEKWLSP VLAY
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