| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2800 |
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| Symbol | |
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| ID | 8226373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 3460715 |
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| End bp | 3462481 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644930630 |
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| Product | signal peptide peptidase SppA, 67K type |
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| Protein accession | YP_003087180 |
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| Protein GI | 255036559 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00705] signal peptide peptidase SppA, 67K type
[TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.17427 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTACAGT TCCTTAAATA TGTCCTGGCG ACTTTCGTCG GCATTATACT CTTCCTCTTC
CTCTCCTTTT TCATCCTCGC GGGCATCGGC TCGCTTTTTT CGTCTGAGGA AAAAGTGGTA
CTCGACGACA AATCCGTCCT CAAACTCGAC CTCAACCAGC CCATTCAGGA AGTGGGCGTC
GAAAATCCGC TCTCCGAATT CGGGATTCCT TTTAGCGGCG AAGACAATGT GGTAGGGCTA
AAAGACATTC TGGACGCATT GAAAAGCGCC AAAGCAGATG ATAAAATCAA GGGAATTTAT
CTGAAAACGG AAGGTCCAGA AGCGGGCTGG GCCACATTGG AAGAAATCCG CACGGCGCTG
CTTGAATTCA AAAAATCGAA GAAATTCGTG GTTACTTATG GAGAGAGCTA TTCCGAAAAA
GGTTACTACA TCGCCTCCGT GGCCGACAAA ATTTACCTGA ACCCGGCCGG CGGCATCGAA
TGGAACGGAC TTTCGGCGGA ATACAGCTTC TTCAAAGGCA CATTCGATAA GCTGGAAATC
AAACCATTGG TATTCCGCGT GGGCGAGTTT AAGAGTGCCA TCGAAATGTT CTCCCGCCAG
GATATGAGCG AAGCGAGCAA GAAGCAATCC GTTGAGCTCA TCGGCGCGAT CAATGATAAT
TTCCTTAAAA ACATTTCGGC ATCCCGCAGC ATCCCCGTGG ATGAGCTCAA AAACCTGGCG
GATTCGCTGG CCGTCGAAAA TCCGAAAGCT GCATTGAAAT ACAAATTCAT CACGCACATG
GGTTACCAGG ACGAGCTTGA AGCCGCCATG AAAAAAGACC TGAAAGTGGC CGCCGACAAA
TCCATTTCCT ACGTGGGCGT GAACAAGTAC ATCCAGGGCG CCAGCCCGGT TGAGAAAGGC
GACTTTAACA AGCGCGTAGG CGTGCTGGTG GCCGAAGGTG AGATCACCGG CGGCGATGGC
GGCGACGGCA ATATCGGCTC CGAGAAATTT GTGAAGGAAT TGAAGGAAAT CCGTGAAAAC
GACAAAATAA AGGCCGTGGT CATCCGTATT AACTCTCCCG GCGGCAGTGC CCTCGCTTCG
GACGTGATGT GGCGCGAAAT CCAGCTTACG GCCAAGAAAA AGCCGGTAAT CGCCTCGATG
TCCGATGTAG CGGCCTCAGG TGGCTACTAT ATGGCCATGG GCTGCGATAC GATCGTCGCC
CAGCCGAACA CGATCACCGG CTCGATCGGT ATTTTCGGGC TAATTTTCAA TGTGACCGAT
TTTATGAACA ATAAACTGGG CATTACATTC GACGGCGTGG GAACAAGTCC GCATGCCGAC
TGGCCTACCG CAACGCGCGA AATGACCGAA TTCGAAAAAG GAATGATCCA GAAGAGCGTG
AATGAAGGCT ACGAGACATT CACCCGCAAA GCCGCAGAAG GTCGCAAAAT GCCGGTTGAA
AAACTAAAAA GCCTCGCGCA GGGGCGTGTA TGGTCGGGTG TGGAAGCCAA GCAAAATGGC
CTCGTGGATG TGCTCGGCGG CGTGGATGAT GCGATCAAAC TAGCGGCCAA GGCGGCCAAA
CTGAATGAAG GCGATTACCG CATCCGCTAC TACCCCGAAA AGAAACGCCC GCTTGACGAA
ATGTTCGAAA AACTGATGGG CAACAAAGAG GAAAAGGTAA CAAACAAGGC GCTCGGCGAC
CTGGCTCCCT ACGTGAAGAT GTATAAAAAG CTTATGAATA TGGGTGGAAT GCAAACCAGG
ATGCCGTTCG AGCTGGTAAT CCGCTAA
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| Protein sequence | MLQFLKYVLA TFVGIILFLF LSFFILAGIG SLFSSEEKVV LDDKSVLKLD LNQPIQEVGV
ENPLSEFGIP FSGEDNVVGL KDILDALKSA KADDKIKGIY LKTEGPEAGW ATLEEIRTAL
LEFKKSKKFV VTYGESYSEK GYYIASVADK IYLNPAGGIE WNGLSAEYSF FKGTFDKLEI
KPLVFRVGEF KSAIEMFSRQ DMSEASKKQS VELIGAINDN FLKNISASRS IPVDELKNLA
DSLAVENPKA ALKYKFITHM GYQDELEAAM KKDLKVAADK SISYVGVNKY IQGASPVEKG
DFNKRVGVLV AEGEITGGDG GDGNIGSEKF VKELKEIREN DKIKAVVIRI NSPGGSALAS
DVMWREIQLT AKKKPVIASM SDVAASGGYY MAMGCDTIVA QPNTITGSIG IFGLIFNVTD
FMNNKLGITF DGVGTSPHAD WPTATREMTE FEKGMIQKSV NEGYETFTRK AAEGRKMPVE
KLKSLAQGRV WSGVEAKQNG LVDVLGGVDD AIKLAAKAAK LNEGDYRIRY YPEKKRPLDE
MFEKLMGNKE EKVTNKALGD LAPYVKMYKK LMNMGGMQTR MPFELVIR
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