Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_2787 |
Symbol | |
ID | 8226359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 3444483 |
End bp | 3446681 |
Gene Length | 2199 bp |
Protein Length | 732 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644930616 |
Product | Radical SAM domain protein |
Protein accession | YP_003087167 |
Protein GI | 255036546 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.231637 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0637853 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAAAGA AGATACTCCT CGTTACCCCG CCATTTACCC AGCTCAATAC GCCTTACCCA GCCACCGCAT ACCTGAAAGG TTTTTTGAAC ACTTTGGGAA GGGAGTCGTA TCAGGCCGAT CTGGGGATTG ATGTGATCCT GGAATTGTTT TCTTCCAAAG GATTAAAACG GCTTTTCGAA ATGCTCGAAG CGTCCGATAT TGAGCTGACA GACAATGCTT TCCGGATTTA TGCGCTTCGG GACGAATACA TTTCGACGAT CGATCCGGTG ATCCGTTTTC TCAAAAACAG CAATCCCACA TTAGCACACA GCATTTGCGA CCGCACGTAC TTGCCCGAAG CAAGCCGTTT CCAGCAGCTC GAAGACCTGG ATTGGGCATT CGGTACGATG GGAATCCACG ATAAGGCGCG GCATTTGGCG ACTTTGTACC TCGAAGACCT GGGCGATCTG ATCCAGGAGG CCATCGACCC GCATTTCGGT TTCAGCCGGT ATGCCGAGCG GCTGGGGCGT TCGGCGACGA GTTTTGATGA AATGGAGGCG GCGCTTGAAA CGCCGGATAC GCTGCTTTCG CAAACGTTGA AGGATGTGCT CGAACGCAAA GTGAAGCAGT ATAGCCCTGA TATCGTGTGC ATTTCGGTGC CTTTTCCGGG GAATTTGTAT GGCGGATTCA AATGCGGCCA GTTTCTTAAA AAGAATTATC CCCACATCAA GATCGTGATG GGCGGCGGCT TTGCCAATAC CGAACTGCGC TCGCTCCAAG AGCCGCGGGT GTTCAATTAT ATTGATTTTG TGTGCCTGGA TGACGGCGAG GCGCCGCTCA TGTCGCTGTT GGAACATCTC GACGGCGAGC GCGAACTTTC CGGTCTGAAA CGCGTGTATT CGCGGGTGGA CGGCACCGTC GTGTATCATA ACGGCGCGAA GGAAAAGGAC GTGCCGCAGC GCGAAACGGG CACGCCGGAT TACAGTGACC TGCCTTTGCA TGACTACCTT TCTGTGATCG AGATCGTGAA CCCGATGCAC CGGCTGTGGA GCGATGGCCG CTGGAACAAG CTCACGCTCG CGCACGGATG CTACTGGGGT AAATGCTCGT TCTGCGACAT TTCGCTGGAT TACATTCGCC GCTACGAACC GATGACGGCC TCGCTGTTGT GCGACCGCAT CGAGGAAATT ATCGCACAAA CACAGCAGAA CGGCTTCCAT TTCGTGGACG AGGCCGCGCC GCCCGCATTG CTGCGCGACC TCGCGTTGGA GATCATCCGG AGGAAGCTCA CGGTGGTTTG GTGGACGAAT ATCCGTTTCG AAAAGAATTT TACGCATGAT TTGTGCCTGT TGCTCAAAGC GTCGGGCTGT ATAGCGATTT CCGGCGGGTT GGAAGTAGCG TCAGACCGGC TGCTCGACCG CATGAAAAAG GGCGTTACCG TGGCCCAGGT GGCGCGTGTA GCCGATGCAT TCACGCAGGC GGGCATTATG GTGCATGCGT ACCTGATGTA TGGTTTCCCG ACCCAAACCG CCCAGGAAAC AATCGATTCG CTGGAAATGG TGCGGCAGAT GTTTCAGCTG GGCATCGTGC AGTCGGGGTT CTGGCACCGG TTTGCGATGA CGGCCCACAG TCCCGTCGGG CTGCATCCCG AAGCATTCGA CGTGATGCGC CTCGGGCCGG ACACGGGTAC ATTTGCCAAT AACGACCTCG AACACCAGGA CCCGCTCGGG GCCGATCATG ACCGGTTTGC CGAAGGTTTG CGCAAATCGC TTTTCAACTA CATGCACGGC GTCTGCCTCG ACTTCCCATT ATCCGAATGG TTCGATTTCA GGACACCGCC GACTTCCATT CCACCGAATT ACCTTGAAAA AGCCATCCAC GCACCCGCAG AACTGGCCGC GCGGCCGAAT GCGGTGATCG TCTGGACGGG AAGTTTACCG GAAATGGCCG TTTTTGAAGA AAGAAAGGGC AAAAAAGTGC ATGAAATAGC CGAACTCGTT TTTTACAACA AGAAAAAAGA ATGGGCTGTG GAAGCGGAGG TCGGGATAGG CGAGTGGCTT ACCGAAATGC TGCCGAAACT CCTGATCGCC AACCCGGAGC CTTATCCTTT TGAGCAGTTC AAAAATGATT TCGAAACGGC GGGCCTCGGG CAGTTCGAGA CATTTCTCAA CTCCCGCACA TGGCAGGAGT TGAAAAACGG TGGTATGCTG GTGCTGTAA
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Protein sequence | MKKKILLVTP PFTQLNTPYP ATAYLKGFLN TLGRESYQAD LGIDVILELF SSKGLKRLFE MLEASDIELT DNAFRIYALR DEYISTIDPV IRFLKNSNPT LAHSICDRTY LPEASRFQQL EDLDWAFGTM GIHDKARHLA TLYLEDLGDL IQEAIDPHFG FSRYAERLGR SATSFDEMEA ALETPDTLLS QTLKDVLERK VKQYSPDIVC ISVPFPGNLY GGFKCGQFLK KNYPHIKIVM GGGFANTELR SLQEPRVFNY IDFVCLDDGE APLMSLLEHL DGERELSGLK RVYSRVDGTV VYHNGAKEKD VPQRETGTPD YSDLPLHDYL SVIEIVNPMH RLWSDGRWNK LTLAHGCYWG KCSFCDISLD YIRRYEPMTA SLLCDRIEEI IAQTQQNGFH FVDEAAPPAL LRDLALEIIR RKLTVVWWTN IRFEKNFTHD LCLLLKASGC IAISGGLEVA SDRLLDRMKK GVTVAQVARV ADAFTQAGIM VHAYLMYGFP TQTAQETIDS LEMVRQMFQL GIVQSGFWHR FAMTAHSPVG LHPEAFDVMR LGPDTGTFAN NDLEHQDPLG ADHDRFAEGL RKSLFNYMHG VCLDFPLSEW FDFRTPPTSI PPNYLEKAIH APAELAARPN AVIVWTGSLP EMAVFEERKG KKVHEIAELV FYNKKKEWAV EAEVGIGEWL TEMLPKLLIA NPEPYPFEQF KNDFETAGLG QFETFLNSRT WQELKNGGML VL
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