Gene Dfer_2785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2785 
Symbol 
ID8226357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3442749 
End bp3443312 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content45% 
IMG OID644930614 
Productpentapeptide repeat protein 
Protein accessionYP_003087165 
Protein GI255036544 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.119978 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAATT CCCGCAATTT CGACATTATA GAAAACAAAG ATTTTAGCAT TGAGCCATTG 
CTGGAAAGCA GCTACGAGCA GGTCCGGTTT GTTCAATGCA GCTTCCCGGA CCTGTCCGGT
ATCGACTTCA TCGACTGCGT TTTCCAGGAT TGTAATCTGA GTAATGCGTC GGTGAAAAAT
TGTAAAATTT CCGATGTCGA GTTCATCAAC TGCAAGCTCA CGGGTGTCAA TTTTTCCGAA
AGCAAAGACT TTGCATTCGC AGCTATTTTT GAAAACTGCA TTCTCGATTA CGCCATTTTC
GAAAGGAAGA AGCTGAACAA AACCGGATTC AGCAACTGCA AAATTCACAA TGCAGATTTC
ACGCAGGCCG ACGTTTCGAA ATGCAAAGTG CATAACTGCG ATTTCTGGGA CGCTGTTTTC
GATGGCACCA ACCTCGGCGG AGTCGATTTT TCAACCAGCA AAAACTTCAC GATCGATCCC
ACGGCCAACA ATATCCGCAA AGCGAAATTC CTGTCGTCGG ACCTGGCCGG GCTGCTCACG
AAATTTGATA TTATTATCAA ATAG
 
Protein sequence
MRNSRNFDII ENKDFSIEPL LESSYEQVRF VQCSFPDLSG IDFIDCVFQD CNLSNASVKN 
CKISDVEFIN CKLTGVNFSE SKDFAFAAIF ENCILDYAIF ERKKLNKTGF SNCKIHNADF
TQADVSKCKV HNCDFWDAVF DGTNLGGVDF STSKNFTIDP TANNIRKAKF LSSDLAGLLT
KFDIIIK