Gene Dfer_2703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2703 
Symbol 
ID8226275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3340384 
End bp3341706 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content53% 
IMG OID644930533 
Productpeptidase M16 domain protein 
Protein accessionYP_003087084 
Protein GI255036463 
COG category[R] General function prediction only 
COG ID[COG0612] Predicted Zn-dependent peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTCC GAAAAATTCT ATTCGCCGTG GCCGCGCTGA CGGGCCTCGG CGTGGCGCAC 
GCGCAAACCC GGCCGGAGGA TGTGAAAACT TTCACGCTGC CCAACGGCAT GAAATTCCTC
GTTTTGGAAG ACCATTCGAT CCCGACGGCC AACATGTACC TCTTTTGGAA AGTGGGCTCG
CGCAACGAGG TGCACGGCAT TACCGGCCTC TCCCATTTCT TCGAACACAT GATGTTCAAC
GGCTCCAAAA ATTACGGCCC CAAGCAGTTC GACCGCGTGA TGGAAGCCAA CGGCGGCTCC
AACAACGCGT ACACGAACGA AAACGTGACC GTGTACACCG ACTGGTTCCA GAAAGACGCG
CTGGAAACGA TTTTCAAACT CGAATCCGAC CGCATCGGCC ACCTCACGAT CGACCCTAAA
ATGGTGGAAA GCGAGCGCGG CGTGGTGCTT TCGGAGCGCA GTACAGGGCT CGAAAACAGT
AATTATCGGG TGATCAATGA GCTGGTCCAG TCGGTCGCAT TCCAGGAGCA TCCTTATATG
TTTCCCGTGA TCGGCTTTGA GTCGGACATT AAGAGCTGGA CGCAGGCTGA CCTTGAAAAT
TATTTCAAAA CCTACTATTC ACCTAACAAC GCAACGGTTG TGGTGGTGGG TGATATTAAA
TATGAAGTGG TCAGGAAACT GGCTGATCAG TACATGGCCC CGCTTGCCGC GCGCGCCCTC
CCGCCGAAGA TCCGCACCGT GGAGCCGCCG CAGAATGGCG AGCGCCGCGT GACGACCTAC
AAAGACATTA CCACACCCAA CGTGCTCCTC GCCTACCACG TCCCCGAAAC CGCCCACGCC
GATTATTATG CGCTGGACCT GTTGAGCAGC TTGTTAAGCT CGGGCAACTC ATCGCGGCTG
GTGAAATCGC TGGTCATGGA TACTACCATT GCTTCCACGG TTTTCACAGG GCTCGACAAT
GGCTTCGACC CCACATTATT TGCCGTTTAC GGCGTGGCTG GGGATAATAT CTCCGCTCCC
GACCTTGAAA AAGCCATTGA AAAGCAGATC GATATGATCA TCCAAAACGG CGTTACCGAT
TCGGAATTAC AGAAAGTGAA GAACCAGAAA CTCATGGAAT TTTACCGCAC GCTGGAAACC
ATTAATGGCA AAGCGAACAG TTTGGGAACT TACGACGTGT TTTTTGGGGA TTATAAAAAG
ATGTTCGAAG CGCCGGAAAA CTATAAAAAG GTCACTGCGG ACGACATTAA GCGCGTTGCC
GGCCAGTACT TCACCGAGCG CAACCGCACT GTGGGCTACC TGCTGCCCGA AAAATCGAAA
TAA
 
Protein sequence
MKLRKILFAV AALTGLGVAH AQTRPEDVKT FTLPNGMKFL VLEDHSIPTA NMYLFWKVGS 
RNEVHGITGL SHFFEHMMFN GSKNYGPKQF DRVMEANGGS NNAYTNENVT VYTDWFQKDA
LETIFKLESD RIGHLTIDPK MVESERGVVL SERSTGLENS NYRVINELVQ SVAFQEHPYM
FPVIGFESDI KSWTQADLEN YFKTYYSPNN ATVVVVGDIK YEVVRKLADQ YMAPLAARAL
PPKIRTVEPP QNGERRVTTY KDITTPNVLL AYHVPETAHA DYYALDLLSS LLSSGNSSRL
VKSLVMDTTI ASTVFTGLDN GFDPTLFAVY GVAGDNISAP DLEKAIEKQI DMIIQNGVTD
SELQKVKNQK LMEFYRTLET INGKANSLGT YDVFFGDYKK MFEAPENYKK VTADDIKRVA
GQYFTERNRT VGYLLPEKSK