Gene Dfer_2596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2596 
Symbol 
ID8226168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3202219 
End bp3203682 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content56% 
IMG OID644930427 
Productcoagulation factor 5/8 type domain protein 
Protein accessionYP_003086978 
Protein GI255036357 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3669] Alpha-L-fucosidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAC AAATAACCGG TCTCCTCTGC CTGACAGCGT CGATCGCCTT TGCCCAAACA 
CCCCCGAAAC CTTACGGTGC CCTGCCGGCG CCGCGCCAGC TCGCGTGGCA CGAGACCGAA
GTGTACGGTA TCATGCACTT CACGCCAACC ACTTTCGAAA ACAAGGAGTG GGGCTACGGC
GATGCAGATC CCAAGACTTT CAACCCCACC GATTTCAACG CCGACCAGAT CGTCTCGGCC
GCCAAAGCCG GTGGCCTGCG CGGGATCGTG CTTGTGGCGA AACATCACGA TGGTTTCTGC
CTCTGGCCAA CCAAAACGAC CGACTATAAC ATTACCAAAA GCCCTTTCCG CGGCGGTAAG
GGGGATTTGG TGCGCGAAGT GGCCGATGCG GCGCGCAAGC AAGGACTGAA ATTCGGAGTA
TATTGCTCGC CCTGGGACCG TAACAATGCG AAATACGGCA CGCCGGAATA CATCAAAATT
TACCGTGAGC AGCTGCGTGA GCTGTATACG AATTACGGTG ACCTGTTTAT GTCGTGGCAC
GACGGAGCCA ATGGCGGCGA CGGCTACTAT GGCGGCGCAA GAGAGAAACG CTCGATCGAC
AACACAACCT ATTACCAATG GGATTCGACG TGGACCAACT ACACCCGCAA ACTCCAACCG
AATGCGAGCA TTTTCAGCGA TATCGGCTGG GACGTGCGCT GGGCAGGCAA TGAAGACGGC
AGCGTGAACC CGACTTCATG GGCTACGCTC ACTCCCAAGC CATCGGAAGG ACAGAATGTG
GCCGTTCCCG GCCAGGCCAA CGCAACGGAA AACCCCGGCG GTACACGCGG AGGCAAGTTC
TGGATTCCGG CGGAATGCGA CGTACCATTG CGTAAAGGAT GGTTTTACCA CGAAAACGAA
AAGCCGAAAA CACCTGAAAA GCTTTTTGAT CTGTACCTCA AAAGCGTAGG ACGCGGCGCC
GCGCTCGATC TGGGACTGGC ACCCGACACC CGCGGACAAC TGCATAACGA CGACGTGGCC
GTGCTGAAAA CCTTCGGGGA CCGCGTGAAG AACACCTTCG CCACCAACCT GATCGCCCGC
GGTTCATCGA AAGCCGTGAA CGTTCGCGGT TACAATTCGA TTTACAGCGC CAAAAACCTG
CTCGACGGCA AGCCGGACAC TTACTGGGCT ACCGACGACG ATTTCAAAAC ACCCGAAGTG
GTGATCGAAT TATCGCAGCC GATCGTTTTC GATGTGATAA GCTTGCAGGA ATACATCAAA
CTCGGCCAGC GCATTGAAGA ATTCGCCGTG GACGCCTGGA TCGGTAATGA ATGGAAGGAG
ATTTACAAAG GCACCAGCGT AGGTGCCAAG CGCATTGCGC GGCTGGACGT CCCCATTACT
TCCAACAAAC TGCGCCTCCG CGTTACCAAA TCTCCGGTAA GCATTGCCAT CAGCGAGTTT
GGTGTTTACA AGGATGCAGA ATAA
 
Protein sequence
MIKQITGLLC LTASIAFAQT PPKPYGALPA PRQLAWHETE VYGIMHFTPT TFENKEWGYG 
DADPKTFNPT DFNADQIVSA AKAGGLRGIV LVAKHHDGFC LWPTKTTDYN ITKSPFRGGK
GDLVREVADA ARKQGLKFGV YCSPWDRNNA KYGTPEYIKI YREQLRELYT NYGDLFMSWH
DGANGGDGYY GGAREKRSID NTTYYQWDST WTNYTRKLQP NASIFSDIGW DVRWAGNEDG
SVNPTSWATL TPKPSEGQNV AVPGQANATE NPGGTRGGKF WIPAECDVPL RKGWFYHENE
KPKTPEKLFD LYLKSVGRGA ALDLGLAPDT RGQLHNDDVA VLKTFGDRVK NTFATNLIAR
GSSKAVNVRG YNSIYSAKNL LDGKPDTYWA TDDDFKTPEV VIELSQPIVF DVISLQEYIK
LGQRIEEFAV DAWIGNEWKE IYKGTSVGAK RIARLDVPIT SNKLRLRVTK SPVSIAISEF
GVYKDAE