Gene Dfer_2576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2576 
Symbol 
ID8226148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3180094 
End bp3182367 
Gene Length2274 bp 
Protein Length757 aa 
Translation table11 
GC content52% 
IMG OID644930407 
Productsodium/hydrogen exchanger 
Protein accessionYP_003086958 
Protein GI255036337 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCACG TTCCGCAACT AATCATTGAC CTGTCGCTCA TTTTGACGAT GGCCGGTATC 
ATTACCGTAA TCTTCAAGAA ATTGAAGCAG CCTATCGTGT TGGGTTACAT TCTGGCCGGA
TTACTTGTTG GTCCTAACTT CCATTTGTTT CCCACCATTA CCGACATCAA AACCATCGAG
ATCTGGGCCG AGATCGGCGT GATATTCCTG CTCTTCAACC TCGGTCTGGA ATTCAGTTTC
AAAAAACTGG TCAAAGTCGG GAATACGGCT GCTATTACAG GTTTGTTTGA AGTGTCCATG
ATGCTCGTCA CGGGTTTTGT AACCGGGCAA CTGCTCGGTT GGAGCAAAAC CGACAGCCTT
TTCCTAGGTG GCATTATCGC CATTTCCTCC ACCACCATCA TTTTCCGCGC ATTCGATGAG
CTGGGGCTGA AAACACAGAA ATTCACCCGC GTCGTGATGG GCATACTGGT GATAGAGGAT
TTGACGGCGG TATTGCTTAT GGTCTTGCTT TCGACGCTCT CGCTTAGCCA GCAGTTTGCC
GGTTTTGAAC TCATCCAATC CAGCCTCAAA CTGTTCTTTT TTCTGACGAT CTGGTTCCTG
GGCGGCATTT TCGTGTTCCC TACCCTGCTT CGGCGCTACC GGCATCTGAT GAACGACGAA
AGCGTGCTGA TCACTTCGGT GGCATTGTGC TTCGGAATGG TTTTTCTGGT TACCAAAGCG
GGCTTTTCGG CTGCGTTAGG CGCATTCATC ATGGGTTCTA TCCTCGCCGA AACGACGCAC
GCCGAGAAGA TAGAGCATTT GCTTAAACCC GTAAAAGACC TTTTCGGGGC CGTTTTCTTC
ATTTCCGTGG GGATGCTGAT CAACCCCGGC CTTTTGCTGG AATACGCAGT TCCGACGGCA
ATTCTGGTGC TCGTAGTGAT ACTTGGCAAA ACGATGTTCG TCACATTGGG TGCGGTTATC
TCCGGTCAGC CATTGAAAAA ATCGCTGCAA TCCGGCATGA GTTTATCCCA AATCGGCGAG
TTTTCTTTCA TTATTGCCAA TCTGGGCCTT TCCCTGAAAG TAACGAGCGG GTTCCTCTAC
CCGATCGCCG TCGGGGTTTC GGTGATCACT ACGTTTGCTA CGCCTTACAT GATGAAGGCG
TCCGAGCCCC TGTACGAATG GCTCGACCGG CGCCTGCCCG AAAAATGGCG GCATTATCTC
AACCGGTACA GCACCAGCAC CGAAACCATC ACGCAAACTA CTCAATGGAA TGAAATCCTG
AAATCCTACG CCCAGACAGT GATTTTGAAC TCCGTCGTCG TGGTGGGCAT TATCCTGGCG
TCGTCGCGCC AGCTGGCCGA GCAGCTACAC ACGCGCGTGC CTGAGACGTT TATCACCAAT
TCGGTACTTT TTGGCATTAC ATTCCTGCTT ATTTCGCCGT TTTTGTGGGC TTTGGTATTT
AAAAGAGGCA ACAGGAAAGC CTATTCGGCC ATCTGGCTCA GCCGGAAATA CAGCCGCGGG
CCGCTGCTCC TGCTTGAACT TTCCCGGGTA TTCATCGCCA TTCTCCTGAT GGCCTTCCTG
CTCAACTCGT TTTTCTCGAC CAAAACCGCC TTCATGGTGG CGGGCGGCAT CATGATATTG
GGCTTTGCCA TTTTTTACCA GCGGCTACAA CAGTTTTATC ACAAAATCGA AGACCGGTTC
CTGCAAAACC TCAATGCACG CCAACTCGAA GGAAGCGGCA AATCCAAGCG CATTCTCCTG
CCCTGGGATG CTCATTTTGC TTTCCTGGAA GTGAGCGCCG ACTCGAACCT GATCGGCAAG
AGCTTGCAAG AGCTCAAAAT CCGGGAGAAT TTCGGGATTA ATGTAGTGCT AATCGAGCGG
GGCAGCAAAA CGATCCATCT GCCGCGGCCC ACGGAAGTAC TTTACCCATG CGACCGCATC
GAAGTCATCG GCACGGACGA TCAGCTCGAT ATATTCCGGA GCCATATCGA GGTGAATACC
AATGGCGACG TGTACATGGC GCACGAGGAC AATGTGGTGC TGGAACGCGT GGAGGTGAAA
ACGCACCATA ATATCCGCGG CAAAACCATC CGCGACAGCC AGATCCGCGA AATGACACAC
GGCATGATCG TCGGGCTGGA ACGCAATGGC GAGCGCATTC TCAACCCCGA TTCTTCGATG
GTGATCGAAA ACCAGGATGT GCTCTGGATC GCGGGCGACC GGGAGCTGAT CAAGGAGTTT
ATGGCCAACA AGCCGGCCAA CAGTGAGGAA GAAATGGTAG CCGTTACGCG CTGA
 
Protein sequence
MTHVPQLIID LSLILTMAGI ITVIFKKLKQ PIVLGYILAG LLVGPNFHLF PTITDIKTIE 
IWAEIGVIFL LFNLGLEFSF KKLVKVGNTA AITGLFEVSM MLVTGFVTGQ LLGWSKTDSL
FLGGIIAISS TTIIFRAFDE LGLKTQKFTR VVMGILVIED LTAVLLMVLL STLSLSQQFA
GFELIQSSLK LFFFLTIWFL GGIFVFPTLL RRYRHLMNDE SVLITSVALC FGMVFLVTKA
GFSAALGAFI MGSILAETTH AEKIEHLLKP VKDLFGAVFF ISVGMLINPG LLLEYAVPTA
ILVLVVILGK TMFVTLGAVI SGQPLKKSLQ SGMSLSQIGE FSFIIANLGL SLKVTSGFLY
PIAVGVSVIT TFATPYMMKA SEPLYEWLDR RLPEKWRHYL NRYSTSTETI TQTTQWNEIL
KSYAQTVILN SVVVVGIILA SSRQLAEQLH TRVPETFITN SVLFGITFLL ISPFLWALVF
KRGNRKAYSA IWLSRKYSRG PLLLLELSRV FIAILLMAFL LNSFFSTKTA FMVAGGIMIL
GFAIFYQRLQ QFYHKIEDRF LQNLNARQLE GSGKSKRILL PWDAHFAFLE VSADSNLIGK
SLQELKIREN FGINVVLIER GSKTIHLPRP TEVLYPCDRI EVIGTDDQLD IFRSHIEVNT
NGDVYMAHED NVVLERVEVK THHNIRGKTI RDSQIREMTH GMIVGLERNG ERILNPDSSM
VIENQDVLWI AGDRELIKEF MANKPANSEE EMVAVTR