| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2559 |
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| Symbol | |
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| ID | 8226131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 3161399 |
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| End bp | 3162448 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644930391 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003086942 |
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| Protein GI | 255036321 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.99545 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCC TACTCATCTT CCTGGGAATT ATTGCCGTGC TGGGGCTTAC GGCGGCGAAG
TTGCTGAGCA ACAAGGAAAA AACGGAGCAA AAAGTGTATA TCCCCGATCC TGATCCCAAG
GTAGGGGTGA AGGTGGCCGT GGCAGAGGTG CGTGATTTGT CGCAGGAATC GGGTTTTTTG
GGGTCGTTTA ATCCTAACCG GAAGGCGGAA ATCCGTCCGC AGGCCAGCGG CGAGATCGTG
AAATTGAATG TGGAAGTAGG CCAGCATGTG GCGGCAGGTC AGCTGATTGC CAAAATCGAC
GACGAGCAGC TGCATTACCA GGTGGAAGCA TTGCAGGTGA CTTTGGAAGG TTATCAGAAC
GATTTGAAAC GCTATGAAGC ATTGGTGAAA GGCGATGCAG TGCCGGCAGT GAACATCGAG
CGCACCCAGC TGAGCATCCG CAGCACGCAG GCGCAGATCA AGCAATTGAA CAAACAGATT
AAAAACACCA GCATTATCGC CCCGTTCGGC GGCATTATCA CGGCCAAAAT GGTGGAAAAA
GGCTCGGTAG TAAGCCAGGG AACGCCCATC GCGGAAATTA CCGACATTTC TTCATTGAAA
CTGGTGGTAA ATATCCCGGA GAAATCGGTA AATGAGTTCA AAACCGGTAA AAGGATTCCC
GTGCGTACGG ATGTGTACCC GCATGCGAAT TTCAACGGCC GCGTGACGAT GGTAGCCGCA
CAGGGCGACG AGGCGCACAA TTATCCGGTA GAAATCACCG TGCAGAATTC AGGTGCCAAT
CCATTGAAGG CCGGTATGTA CGGCTCGATT GCGAGCGATT CGAAGGTGAA GGGCGAGGCA
TTGGCCGTGC CGCGGCAGGC CATTATGGGC TCGGCGAAGC AGCCGCAACT ATATGTAGTC
GAAAACGGCA AGGCCGCATT GCGCGACGTG AGTGTGGGCG CGACGACGAA CGAATACTAC
GAAATCACCA AAGGTCTCAA AGCCGGCGAC CGCGTGGTGA CGAGCGGGCA GATCAACCTG
CAAAACGGCA CATCGGTTAT TGCGCAATAA
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| Protein sequence | MKRLLIFLGI IAVLGLTAAK LLSNKEKTEQ KVYIPDPDPK VGVKVAVAEV RDLSQESGFL
GSFNPNRKAE IRPQASGEIV KLNVEVGQHV AAGQLIAKID DEQLHYQVEA LQVTLEGYQN
DLKRYEALVK GDAVPAVNIE RTQLSIRSTQ AQIKQLNKQI KNTSIIAPFG GIITAKMVEK
GSVVSQGTPI AEITDISSLK LVVNIPEKSV NEFKTGKRIP VRTDVYPHAN FNGRVTMVAA
QGDEAHNYPV EITVQNSGAN PLKAGMYGSI ASDSKVKGEA LAVPRQAIMG SAKQPQLYVV
ENGKAALRDV SVGATTNEYY EITKGLKAGD RVVTSGQINL QNGTSVIAQ
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