Gene Dfer_2543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2543 
Symbol 
ID8226115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3142143 
End bp3143420 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content54% 
IMG OID644930375 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_003086926 
Protein GI255036305 
COG category[C] Energy production and conversion 
COG ID[COG1252] NADH dehydrogenase, FAD-containing subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.831032 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATCG TAATCGTAGG AGGAGGATTT GCCGGCGTCA ACCTGGCGCT GGACCTTGCA 
AAAAGCAAGA AATTTGACGT AACACTGGTC GACAAGAACA ATTACAACTT CTTTCCGCCG
CTGATCTACC AGGTCGCCAC GGCGTTTTTG GAGCCGTCGA GCATCAGTTA CCCTTTCCGC
AAGCTTTTTT TAGGTAAGGA AAACCTTCAC TTCCGGTTGG GGGAGCTGCA AAGAGTGGTG
CCGGGAGAAA ACAAAATCAT CCTGCATAAT GGCGAACTGA CGTACGATTT CCTTGTATTC
GCCACGGGCG CCGAAACGAA TTTCTTCGGA ATGGAGAACG TTCAGCGGAA TGCTACACCC
ATGAAAACGC TTGAAGATGC GATCAGCATG CGCAACAAGC TGCTCATGCA AATGGAGCAG
GCCACGCTCA GCACCGATCC GGCGGAGATT AAAAAGCTGC TAACCGTGGT AATCGCCGGC
GGCGGGCCTA CGGGCGTGGA AATCTCCGGC ATGTTCGCCG AAATGCGCAA CGGCATTCTT
CGCAAGGAAT ATCCCGAGCT GGCCGGAAAA GGCAGCGAAA TCTACCTCGT GGACGGCAGC
GAAGCATTGC TCTCGCCCAT GAGCAAGGCG TCACAAGAAG ATACCTACGA GGCATTGCGC
AAGCTCGGCG TGAAAATCCG CCTGAACACG CACGTGTCCG ACTTCGTCGA CGACAAGGTG
TACTTTTCCG AGGGTGAGCC CATTGAAGCC AAAACGCTCA TCTGGGCCGC CGGCGTAACG
GGCCGGGTAT TCGAAGGCAT TCCGGCGGAA GCCTACGGCC GCGGGCGCAG GCTGCTTGTG
GATGCTTATA ATAAGGTCAA TAGCACATAT AATATCTACG CGATCGGCGA CTGCTGCCTG
CAAACCACCG ACGAGCATTT CCCGAACGGC CACCCGCAGG TAGCGCAGGT GGCGATCCAG
CAGGGTAAAA ACCTCGCACG CAACTTCGGG CTCATCGCGG AGCACCAGCC ATTGCATGGA
TTCAAATACC ACGACAAAGG CTCGATGGCT ATCATCGGCC GGGCGAAAGC CGTGGTGGAC
CTGCCTTCGC CAAAGGTGCA TTTCAAAGGA GTTATCGCGT GGCTGGCGTG GCTTTTCATA
CACCTCATTT CATTGATCAA CCATCGTAAC CGCATGAAAA CGCTGTACAA CTGGATGGTT
GCCTATTTCA CCAAAGATCA GCCCTTGCGC ATGATCATCA AGCCCTCGGT AGCGCAGGAA
AAGGTCGAAT CGGTTTGA
 
Protein sequence
MNIVIVGGGF AGVNLALDLA KSKKFDVTLV DKNNYNFFPP LIYQVATAFL EPSSISYPFR 
KLFLGKENLH FRLGELQRVV PGENKIILHN GELTYDFLVF ATGAETNFFG MENVQRNATP
MKTLEDAISM RNKLLMQMEQ ATLSTDPAEI KKLLTVVIAG GGPTGVEISG MFAEMRNGIL
RKEYPELAGK GSEIYLVDGS EALLSPMSKA SQEDTYEALR KLGVKIRLNT HVSDFVDDKV
YFSEGEPIEA KTLIWAAGVT GRVFEGIPAE AYGRGRRLLV DAYNKVNSTY NIYAIGDCCL
QTTDEHFPNG HPQVAQVAIQ QGKNLARNFG LIAEHQPLHG FKYHDKGSMA IIGRAKAVVD
LPSPKVHFKG VIAWLAWLFI HLISLINHRN RMKTLYNWMV AYFTKDQPLR MIIKPSVAQE
KVESV