Gene Dfer_2432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2432 
Symbol 
ID8226004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2992265 
End bp2993800 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content54% 
IMG OID644930264 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003086815 
Protein GI255036194 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTCCA CCGAATCCAA TGTTACACAA AGCATTACGC AGGTAATCGC TGCATCTTCA 
TTAGGTACAT TAATTGAATG GTATGACTTC TACATTTTCG GCAGCCTGGC GGTCATTATC
GGGCAGCAGC TCTTCCCGAG CGACGCCGGT GCCTCGGCGC TGATCAACAC GCTGGCAATT
TTCGCGGCGG GCTTTATCGT GCGGCCTTTC GGGGCGCTCG TCTTCGGCCG CCTTGGCGAT
TTGATCGGTC GGAAATACAC GTTTTTGCTT ACGCTCGTGC TCATGGGCGG CTCTACGTTC
CTCATCGGCC TCATTCCTTC CTATTCCAGC ATCGGCTATG CAGCACCCAT TCTGGTGCTG
ATCCTCCGCC TCGTGCAGGG GCTTGCGCTC GGGGGCGAAT ACGGAGGCGC GGCTACCTAC
GTGGCCGAAC ATGCGCCCGT AGGCCGGAGA GGTTTTTTTA CAAGCTGGAT ACAGACCACC
GCGACGCTGG GGCTGTTCCT GTCGCTGGGG GTGATCGTGT TGACAAAAAA TATCATGGGC
GCCGAAAAGT TCGCCGACTG GGGCTGGCGC ATTCCGTTTC TGGTTTCGAT CCTGCTCGTG
GTGGTGTCGA TTTACATTCG CATGAAAATG CATGAATCGC CGGTTTTTTC GAAACTGAAA
GCCGAAGGAA AAGTCTCCGC TAATCCTTTG AAAGAAAGTT TTCAGAAAAG GGCCAATTTC
AAAATGGTGC TTGTCGCACT GTTTGGCGCA ACGATGGGGC AGGGGGTAGT CTGGTATACG
GGACAATTCT ATGCGCAATC GTTTCTTGAA AATACCTGTA AGCTCGATTT TAACGAGTCG
CGTTACATTC TGCTTTGGGC GATCGTTTTT GCCACACCGT TTTTTGTCGT TTTTGGTTCG
TGGAGCGACA AGGTGGGCCG CAAATGGATC ATGCTCACGG GTATGCTGCT CGGCGTGCTT
TGCTACCGGC CGATTTACCA ATATTTTCTC GACGCCACCA ACGTGACCGA AATGCAGAAA
ACCATGCTCC TGAGCGAATC AGAGCCGGTG ATCGAGCGCG GACTCGTTCC CGACAAGGCC
GACTCGCTCA TCACAACCAC CGTTACCAAG ACCCTCACCA ATGGAATGAC ATTCAAGGAA
TCGAAGGTAG AAGTGATCAC CGAAGATGTG CTGGCGGAGG TTCCCGCTGT GCAAACGGTA
ATCAAGGACG TGACGCTTTC GCGGGAGTCG TACATCATGG TGATCCTCCT GGTGTTCTTT
CAGGTGGTGC TCGTAACGAT GGTTTACGGC CCCATTGCCG CATTTCTCGT AGAACTTTTC
CCAACCCAGA TCCGCTATAC CTCCATGTCG CTGCCTTACC ACATCGGTAA TGGCGTTTTC
GGCGGACTGG TGCCGTTTAT CGCCACGCTC ATCGCCTCTT TCCAGGGCTC GACACCGCTT
TCCGGGCTTT GGTATCCCAT CGGCATCGCG GCATTGTCGT TCGTCATCGG TGCGGTGTAT
ATCGACAACC GGCGGGATGA GAATGTAATG GATTGA
 
Protein sequence
MRSTESNVTQ SITQVIAASS LGTLIEWYDF YIFGSLAVII GQQLFPSDAG ASALINTLAI 
FAAGFIVRPF GALVFGRLGD LIGRKYTFLL TLVLMGGSTF LIGLIPSYSS IGYAAPILVL
ILRLVQGLAL GGEYGGAATY VAEHAPVGRR GFFTSWIQTT ATLGLFLSLG VIVLTKNIMG
AEKFADWGWR IPFLVSILLV VVSIYIRMKM HESPVFSKLK AEGKVSANPL KESFQKRANF
KMVLVALFGA TMGQGVVWYT GQFYAQSFLE NTCKLDFNES RYILLWAIVF ATPFFVVFGS
WSDKVGRKWI MLTGMLLGVL CYRPIYQYFL DATNVTEMQK TMLLSESEPV IERGLVPDKA
DSLITTTVTK TLTNGMTFKE SKVEVITEDV LAEVPAVQTV IKDVTLSRES YIMVILLVFF
QVVLVTMVYG PIAAFLVELF PTQIRYTSMS LPYHIGNGVF GGLVPFIATL IASFQGSTPL
SGLWYPIGIA ALSFVIGAVY IDNRRDENVM D