Gene Dfer_2381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2381 
Symbol 
ID8225953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2940465 
End bp2941688 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content53% 
IMG OID644930213 
Productpeptidase M28 
Protein accessionYP_003086764 
Protein GI255036143 
COG category[R] General function prediction only 
COG ID[COG2234] Predicted aminopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.534474 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATACC TGTTTTCTGC CATACTGGCG CTCGCGGGCG CCTCGGACGC GCTTGCGCAG 
CGTTTTCAAA CCGCACCGAT CCGCAAGCAC ATCGAATACC TCGCATCCGA CGATCTCGAA
GGTCGCGGAA CGGCCACCCT CGGCGAAGTG CGGGCAGCCA ACTACATAGC GGCAGCATTC
AAGGAAATCG GTTTGAAACC GGCGGGCACG AAAGGGTATT TCCAGCCGTT CGAAGTGTCG
TTCGCGGTGG ATGGCGAAGC CCATGACCTC ACGGGCAGGA ATGTGGTCGG GTTTCTTGAT
AACGGTGCTC CTAAAACGAT CGTGATCGGC GCCCATTACG ATCACCTGGG CAAGGGGTTT
CAGGGAAGTT CGCTTTCTCC CGACAGCAAG AACAAAATCC ATAATGGAGC CGACGACAAT
GCCTCGGGCA CGACCGGGGT AATCGAGCTG GCCCGTTACT TTGCGGGTAA TCAGGTGAAA
GAGAAGCATA ACTTCCTGTT TATCACCTTT TCCGGCGAAG AATTGGGGCT TATCGGTTCA
AAGCATTATG TGGAAAAACC AACCTTGCCG CTGAACAGCT TTTCGGCGAT GATCAATATG
GATATGATCG GCAGGCTGGA TGAGCAGAAA GGCATTATCG TGTCGGGCTG GGGCACGAGT
AAGGTTTGGG GCAAACTGAT TCCCGACCTC GCTAAAAAGC AAAAACTGAA CTATACGGTC
GATTCCTCCG GCGTAGGTGC TTCGGACCAC ACTTCGTTTT ACCTGAAAAA TATTCCCGTG
GTACAATTCT TCACCGGCGG CCACGGCGAT TACCATAAAA TTTCGGACGA TCCCGATAAG
ATCAACTATG AAGGCGAAGT AAGAATACTT ACTCTGATAT CCGAACTCCT CGAAGGATTG
GACAAGGAAA CCACCGAGCC TGAATTCCTC ACCGCGGGCA ATCCGCATTC CGGCAGTACT
ACCAGCAATT TCAAAGTTAC GCTGGGTGTA ATGCCCGATT ACAGTTACAC CGGAAAAGGC
CTGAAAATCG ACGGCGTTTC GAAAGCCCGG CCGGCAGAGA AGGCAGGCAT CATAGCCGGC
GACATCATCA CCAAACTCGG CGGTGAGCCC ATCGGCACCA TTTACGACTA CATGGAAATC
CTCGGCAAGC ACGAAAAAGG CCAAACCGTA GAAGCAGAAT TCCAGCGCGG CAGCGAGACG
AGGAGGGTGA AGGTGACGTT TTGA
 
Protein sequence
MKYLFSAILA LAGASDALAQ RFQTAPIRKH IEYLASDDLE GRGTATLGEV RAANYIAAAF 
KEIGLKPAGT KGYFQPFEVS FAVDGEAHDL TGRNVVGFLD NGAPKTIVIG AHYDHLGKGF
QGSSLSPDSK NKIHNGADDN ASGTTGVIEL ARYFAGNQVK EKHNFLFITF SGEELGLIGS
KHYVEKPTLP LNSFSAMINM DMIGRLDEQK GIIVSGWGTS KVWGKLIPDL AKKQKLNYTV
DSSGVGASDH TSFYLKNIPV VQFFTGGHGD YHKISDDPDK INYEGEVRIL TLISELLEGL
DKETTEPEFL TAGNPHSGST TSNFKVTLGV MPDYSYTGKG LKIDGVSKAR PAEKAGIIAG
DIITKLGGEP IGTIYDYMEI LGKHEKGQTV EAEFQRGSET RRVKVTF